Alteromonas macleodii Black Sea 11: AMBLS11_09435
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Entry
AMBLS11_09435 CDS
T02260
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_09435
Enzymes [BR:
amk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AMBLS11_09435
DNA repair and recombination proteins [BR:
amk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AMBLS11_09435
Prokaryotic type
AMBLS11_09435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFT78464
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Position
2245387..2246811
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AA seq
474 aa
AA seq
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MTVPVSIMWFRQDLRVKDNPALNAACDMGKIVPIYIYDDTTPNGREPGGASKWWLHHSLA
SLNKRLNGHLQIFKGDPRKLIPKLMASFDAKGIFWNRCYEPWQINRDKGIKKTLIDSDYE
AHSFNGSLLWEPMKVLKKDGTPYRVFTPYYKKGCLQIEEPRYPKAPPARITYADVSNEGD
DLASLRLLPTIKWDETIAKTWAPGEDGAADNLADFIQNSARKYKDGRDIPSAKGTSRLSP
HLHFGEVSPNQVWYAIKDKFGNSEDKSIETYLSELGWREFSYYLLFHFPTLPNKNFNDKF
DKFPWRTDAKALKAWQTGRTGIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKNLLLSWHE
GERWFWDTLLDADLASNSASWQWVAGSGADAAPYFRIFNPILQGEKFDSKGKYVRKYCPE
LNKLSDKYIHKPWEAPNAILKEAGIELGKEYPKPIVDLKASRQRALDAFQQIKE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttcctgttagtatcatgtggtttagacaagaccttcgtgtaaaagacaatccg
gcattaaacgctgcttgcgacatgggaaaaatagtccccatctacatctacgatgacaca
acgcctaacggaagagaaccaggaggcgccagcaaatggtggcttcatcattcgcttgcg
tcgttgaataaacgcctgaacgggcatctacaaatatttaagggtgatccccggaaactt
attcccaagttaatggcgtcatttgatgccaagggtattttctggaatcggtgctacgaa
ccgtggcaaataaatcgggataaagggattaagaaaacacttatcgatagtgattacgaa
gctcacagttttaacggtagtttattgtgggaacccatgaaggttctaaagaaagacggt
acaccttaccgagtctttaccccatactacaaaaaaggctgtttacagattgaagagcct
cgttaccccaaagcaccgccagcacgtattacttatgccgatgtaagtaatgaaggtgat
gatttagcatctttacgtttattacccactatcaagtgggatgagaccatcgccaaaacg
tgggctccaggtgaagacggcgccgctgataacctagctgactttattcagaattcagcg
cgaaagtataaagatggaagagatataccatctgcaaaaggtacatctcgcttatctccc
cacctacatttcggggaagtgtcgccaaatcaagtttggtatgcgattaaagacaagttt
ggtaatagcgaagacaagagcattgaaacttatctaagtgaacttggttggcgggagttt
agctattacttattgttccattttccgaccctgcctaataaaaactttaacgataaattt
gacaagtttccctggcgtactgacgcaaaggcacttaaagcatggcagacaggcagaact
ggtattcctatcgtcgacgcgggtatgcgcgaactgtggcaaacaggctacatgcataac
agagtacgtatgattgtgggctcgtttttggtcaaaaacttactgctcagttggcacgaa
ggagagcggtggttttgggacacattgttagatgccgaccttgccagcaatagcgccagt
tggcaatgggtagcgggctcaggtgccgatgcagcaccttacttcaggatatttaaccca
attctgcaaggtgagaaatttgatagcaaagggaaatacgttcgcaagtactgccccgag
ttgaataagttatcagacaaatacattcataagccttgggaagctccaaacgccatattg
aaagaggcaggcatcgagcttggcaaggaatacccaaagcctatcgttgatttgaaagcg
tcgcgtcagcgtgcacttgacgcttttcaacaaataaaagagtag
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