Alteromonas macleodii Black Sea 11: AMBLS11_09440
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Entry
AMBLS11_09440 CDS
T02260
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_09440
Enzymes [BR:
amk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AMBLS11_09440
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AMBLS11_09440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
RUBY_RBDX
RACo_linker
Motif
Other DBs
NCBI-ProteinID:
AFT78465
LinkDB
All DBs
Position
2246815..2248353
Genome browser
AA seq
512 aa
AA seq
DB search
MAALILVLGDQLTETLPAIANAVKSKDTILMAEVREEATYVKHHKKKIAFLFSAMRHFAK
ALRDDNFNVNYVHYNDENNQGGLLAQVKYALNENTFDEVRVTMPGEYRLLKSMEQWENTL
GVPVTICEDNRFLSTPQEFTDWANGKKQLRMEFFYREMRRKHNILMEGRNPIGGKWNYDA
QNRESMPETHKVPKHSTFEIDDITADVIGLVKEEFDDHFGDIDNFHFAVTRKGALSVLNT
FIEERLPNFGQYQDAMVEGKPWLYHSHIAFYLNCGLLTPSEAIHAAEQAYHAGQVPLNSA
EGFIRQILGWREYVRGFYWHFMPNLKTDNYFNNSRSLPSFFWNAETNMNCMRQCIKETQQ
NAYAHHIQRLMVIGNFSLLTELNPEEVQAWYLLVYADAYEWVELPNVAGMILYSDGGNLA
SKPYVASGSYINKMSNYCKNCGYQVSKKTGPKACPFNYLYWHFIDKHKEKLSNNHRMAMI
YKTYGRMKEENIETMKQDAAIFLSKLTKNEEV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttattttagttttaggcgaccagcttaccgaaacattaccggcaatagct
aatgcagtaaaaagtaaagacaccatattaatggcggaagtgcgtgaggaagccacgtac
gtaaaacaccataaaaagaagatagcgtttttatttagtgctatgcgtcattttgccaaa
gcgttgcgcgacgacaattttaacgttaactacgttcattataacgacgaaaacaatcaa
ggcggtttactcgcccaggtaaaatacgcgcttaacgaaaacacgtttgatgaagtaaga
gtgaccatgcccggtgaataccgcctgcttaaaagcatggagcaatgggaaaataccctt
ggagttcctgttacgatttgcgaggacaatcgttttttatccacccctcaggaatttacc
gactgggcaaacggcaaaaaacaacttcgtatggagtttttttaccgtgagatgcgccgc
aagcacaacatactgatggaaggtaggaaccccatcgggggtaagtggaattatgatgcg
caaaatcgtgaatctatgcctgaaactcataaggttcctaaacactcgacgtttgaaatt
gacgacataacagcagatgttatcggccttgtgaaagaggagttcgacgatcactttggc
gatatagataacttccactttgcggtaactcgaaaaggcgcactcagcgtcttaaatact
tttatagaagaaagattacctaattttggtcagtatcaagacgccatggtggaaggtaag
ccttggctttaccactctcatatagccttttatttaaactgcggtttgttaacgcctagc
gaagctatccacgctgctgagcaagcctaccacgcaggacaagtacctctaaattctgcc
gagggatttatacgtcagatcctaggctggcgcgagtatgttagaggtttctattggcac
tttatgccaaatttgaaaacggataattactttaataacagccgctcactaccttcgttc
ttttggaacgctgaaacgaatatgaattgcatgcggcaatgcattaaagaaacgcaacaa
aacgcttacgcccatcacatacagcgtctgatggtaattggtaacttcagcttgttgacc
gaacttaacccagaagaggttcaagcatggtatttgttggtatacgccgatgcctacgag
tgggttgagcttcctaacgtagcaggcatgattctgtatagcgatggcggcaacttagcg
agtaagccttatgtcgcgagcggtagttatatcaacaaaatgagcaactattgcaagaac
tgtggataccaggtttcgaaaaaaacggggccgaaagcctgcccattcaactatttgtat
tggcactttattgataagcacaaagaaaaactgagtaacaatcatcgaatggccatgatt
tacaaaacctatggacgaatgaaggaagaaaacatcgagaccatgaagcaagatgctgca
atatttctatcaaagctaaccaaaaatgaagaagtctga
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