Alteromonas macleodii Black Sea 11: AMBLS11_10805
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Entry
AMBLS11_10805 CDS
T02260
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMBLS11_10805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_10805
Enzymes [BR:
amk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AMBLS11_10805
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMBLS11_10805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFT78738
LinkDB
All DBs
Position
complement(2541331..2544987)
Genome browser
AA seq
1218 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLLRQQPLGVFTPETILVESPGMQHWVSMQLATEHGVAMNID
YPLPVRFMWNTARAVLGQDTVPKQSPYRREVLTWRIDNILQDGSLMSGDAFEQVNRYWQN
AGSEQEQGLQRLQLATALADVYEQYLLYRPDWLFKWEANERAVFDDMEIWQSEIWRILAK
EQPLHPARLHQMTLEALDGGHIPNQHPTSNLPKRVIVFAINTMAPQLIAFFDALAQHIDI
HIFHLNPSVNYWGEAKSSSEQAKLLRLEGLKKWMEEDQSNPLLGNLGKQGRELFNLLTEL
DTFEISAFDSPDFDEGDNNGENNRSRGLLEYIHNDILRAAPPKPLDCGLKSGDVNASALK
EKDDSVTIMCTHSALREVQVLHDHLLHWLSQDKTRTPSDILVMCPAIENYAPFVDAVFHR
VGTKSLAGTGQVRLPCTIADRSPMDAEPLIAAFMALLQLPDSRFGVSDIMDYLQLDSVQK
RFAVSQDDIEQMVVWLKQAHIHWGLNSAHKTAVSEGVDLDETYSWWWGIRRLLMGMLAPD
SEVIVSDLLTIPDVEGQSALTLGKLIDVVALLGEFAQALTAPRTPLQWSKALIALRDACF
MPIKEQQQSWDLIAKVAADLAARCEEAGYEHELSLRQVRDLLLNRFSSPDAGNHFMTGQV
TVCSMLPMRSIPFKKVCILGLNDSEFPRKSSPLGLDLMASSGRQIGDRSRRLEDRYLFLE
AIISTRESLYLSYQGNDVTNNSERQPSLVLAEFMDMLENSYELDLSKYSVNAPLHPFSEA
GFTGQIPSYETGWLRLADALQQAKLHSDKVEDEFVDEGNTAVLAPSADTLSSQTLRLSSI
QIARAFKDPLEYFSIQRLGVNLSQSFTLLENSEPFETNALLRYQVLDAIFSSPERIAPEK
DDVTQLSYSEKVITFASLRGDIPNNPVARDEVDMWKEGALALSQAMGPHDAEPKKAHFQG
KYITFTSSALLGSEALVELCAGKVDAHRALSFFISQLVFSSSDEETSYSNYPLDIYSCAW
EKGETILKKQRFPAYDRETAVRLLLFIEQLYMAVYTAPTPVYLSLFGTFMPGTRNSDTKA
VVESVKPEMFTDILRALLDSADGTNETDKAILRQVQQAVDELCPFIDKEDDVASETTSEK
HEKAKRTLDQAVALFDSIELQRALTDWQQSNGQFSADMANNPYLNWLFPQGVSWNDVPHL
SAFVLLAMVNNASQEEKL
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcgctatatccctctaataaattagaacatttaagttttcttcttaccacgctt
ctacgtcagcagcccttgggtgtatttacgccagaaactatcttggttgaaagcccaggt
atgcagcactgggtcagtatgcagcttgccactgaacatggcgtggcgatgaatattgat
tatcccttaccagtgcgtttcatgtggaatacggcacgtgcggtattggggcaggacaca
gtacctaagcagtcaccttatcgccgggaagtactaacctggcgcattgacaatattctc
caagatggctcgctgatgagcggtgatgcctttgagcaagttaatcgatattggcaaaat
gccggaagtgaacaagagcaggggctacagcgccttcagcttgcaactgcccttgctgac
gtgtatgagcagtacttgttgtatcgtccggactggttgttcaagtgggaagctaacgaa
cgtgcagtgtttgacgatatggaaatatggcaaagtgaaatttggcgtattctagctaaa
gagcagccgttacatccagcacgcttgcaccaaatgacccttgaagcattagacgggggt
catataccgaatcagcatccaacgagtaatctacctaagcgtgtcatagtgtttgccatc
aatactatggcgccgcaattgatagcattctttgacgccctcgcgcagcacattgatatt
catatatttcatctgaaccctagcgtaaattactggggagaggcgaagagcagcagtgaa
caagcaaagttattgcgtttagaaggccttaaaaaatggatggaagaagatcagtccaat
ccgttgcttggcaacctaggtaagcaaggcagagagcttttcaatttactgaccgaactc
gatacctttgaaataagtgcgtttgattcgccagattttgatgagggggataataatggt
gagaataaccgcagtcgcggtttgctcgagtatattcacaatgacattttgcgggctgct
ccccctaaaccgctagactgcgggttaaaaagcggtgatgtaaatgcctccgctctaaaa
gaaaaagatgatagcgtcactatcatgtgtacccattccgcgcttcgcgaagtgcaagtg
ttacacgaccacttattacattggttatctcaggataaaacgcgcaccccatcagatatt
cttgtgatgtgccccgccatcgaaaactacgccccgtttgttgatgccgtatttcacaga
gtaggcactaaatccttagctggcaccggacaggtcaggcttccttgtaccattgcagac
agaagccctatggacgcagaaccattgattgcagcgtttatggcgctgttacagctgcca
gatagccgttttggcgtgtcggacatcatggattacctgcagctagattcagtacaaaag
cgtttcgccgtgtcccaagacgatatagagcaaatggtggtctggctaaaacaagcgcac
attcactggggtcttaatagcgcgcataaaactgctgtctcagaaggtgttgatttagat
gaaacctacagctggtggtggggaattcgccgcttgctgatgggcatgctcgcaccagat
agtgaagtcattgttagtgacctacttactatccccgacgtagaggggcaaagtgcgctt
acactaggcaagcttattgatgttgtggcgctactcggcgagtttgcccaagcgttgaca
gccccaaggacgccgttgcaatggtctaaagccttaatagcgctaagagatgcgtgtttt
atgccgataaaagagcagcagcaaagttgggatcttattgccaaagttgcagctgatctt
gctgctcgatgcgaagaggcaggttatgaacacgaactcagtcttcgtcaggtgcgcgac
ctgctactcaatcggttttcgtcgccagatgccggtaaccactttatgaccggtcaggtt
acggtgtgttctatgctgccaatgcgaagcataccgtttaaaaaagtgtgtattttgggg
ctgaacgacagtgagttccccagaaaatcaagcccgctaggtctcgatttaatggcgagc
tctggccggcagattggcgatcgctcacggcgcttggaagacaggtatttatttctcgaa
gccattatttccaccagagagagcttatacttaagttatcaagggaacgacgtaactaat
aacagtgagcgacaacccagcctggtattagctgagttcatggatatgttagaaaacagc
tatgaactggatttatccaaatacagcgttaatgcgccgctacatccattcagcgaagcg
gggtttactgggcaaattccaagctacgaaacagggtggctacggctcgctgacgcgcta
cagcaagcgaaattacatagcgataaagtagaggatgaatttgttgatgaaggcaataca
gcggtgctagcaccttcagccgatacgctctcatcacaaacacttcgtttatcaagtatc
caaattgcgcgtgcctttaaagacccactagagtatttttctattcaacggctcggcgta
aacctgtctcaatcgtttactttactcgaaaatagcgagccgtttgagacaaatgcgctg
ctgcgttatcaggtgctcgacgctatcttttcgtctccagagcgcattgcgccagaaaaa
gatgatgtcacccagctttcatatagtgaaaaagtgatcacgtttgcttcgcttaggggg
gatatccctaataatcccgttgccagagatgaagttgacatgtggaaagagggggcgttg
gcactaagtcaggcaatgggccctcacgacgcggaacctaaaaaagcgcatttccaaggt
aaatatattacctttacttcatcggctttattaggcagtgaagctttagtcgagctttgt
gcaggaaaggtcgacgcacaccgagcgttgagttttttcatctcccaattagttttttca
agcagcgatgaagaaactagctacagcaactatccactggatatctattcttgcgcttgg
gaaaagggcgaaaccattttgaaaaagcagcgcttccccgcttatgacagggagaccgcg
gttcgtttactcttgtttattgagcagctttacatggcggtttatacggcgccgacgcct
gtgtatttaagcttgttcggtacttttatgcccggcactagaaactcagacactaaggct
gtagtggaaagcgtaaaacctgagatgtttaccgatatcctgcgtgcgctactagatagt
gcggacggtactaatgaaaccgacaaagcgatacttcgccaagttcagcaggcagtagat
gagctgtgcccattcattgataaggaagacgatgtagccagcgaaaccacaagtgaaaaa
cacgaaaaagccaaacgaacattggatcaggccgtagcgctttttgactcgatagaatta
cagcgagcgttaactgactggcagcaaagtaacgggcaatttagtgccgatatggcaaac
aacccttatcttaactggctgtttccacagggcgttagttggaacgatgtgccgcattta
agtgcttttgtactgcttgctatggtaaataatgcgtctcaggaggagaagctatga
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integrated database retrieval system
