Alteromonas macleodii Black Sea 11: AMBLS11_12225
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Entry
AMBLS11_12225 CDS
T02260
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_12225
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMBLS11_12225
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
SLFN-g3_helicase
AAA
AAA_14
RecA
Viral_helicase1
AAA_24
GvpD_P-loop
ABC_tran
nSTAND3
KdpD
Zeta_toxin
AAA_16
Rad51
cobW
AAA_22
NTPase_1
AAA_29
DUF5906
Zn_ribbon_8
zf_UBZ
Motif
Other DBs
NCBI-ProteinID:
AFT79018
LinkDB
All DBs
Position
complement(2879154..2880521)
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AA seq
455 aa
AA seq
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MAKRKTAYVCSDCGAEFPRWQGQCSECKAWNTISEFVVASAKSVARQTTSGYAGQTAAKI
ETLNAIDLESLPRFSSTFKELDRVLGGGIVPGAAMLIGGSPGAGKSTLLLQVMCQMAKSE
TALYVTGEESLQQVAMRAKRLNLPDDKLMMLAETNVETICDLALTKKPKIMVIDSIQVMH
VSDVQSAPGSVSQVRESAAYLTRFAKQNHIAMFIVGHVTKDGNLAGPKVLEHCIDSSMML
EGESDGRYRTLRSHKNRFGAVNELGVFAMTEKGLKEVSNPSAIFLSRGDNETPGSSVMVI
WEGTRPLLVEIQALVDYSQMSNPRRIAVGLDQNRLSMLLAVLHRHGNVQMNDQDVFVNVV
GGVRVSETSADLALLLAMISSFRNRSLPRDLIVFGEVGLAGEIRPVPNGTERIIEAAKHG
FKRAIVPKANAPKQAINGMKVVPVARLSEALDALE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtaaaactgcttatgtgtgttctgactgcggggcagagtttcctcgttgg
caggggcaatgttcggaatgtaaagcgtggaacacaataagtgagtttgtggttgcaagt
gccaaaagtgtcgcgcgccaaaccacgtcaggttacgcagggcaaaccgctgccaaaata
gagactttaaatgcaatagatctcgaatcactaccacgattctcgtcaacatttaaagag
ctcgatagagtgttagggggcggaatagtccctggcgcagctatgctaatcggtgggtcg
ccaggtgcaggtaaaagtacgcttttgcttcaagttatgtgtcagatggcaaaaagtgaa
actgcgctctacgttacaggggaagagtcgctgcagcaggttgccatgcgagcaaagcga
ttaaaccttcccgacgacaaattgatgatgcttgccgaaactaatgtggaaactatctgc
gatttagcgctcacgaaaaagcctaaaatcatggttatcgattcaattcaggttatgcat
gtgtcagatgtgcagtctgcgcccggcagtgtgtcgcaggtacgcgaaagcgcagcgtat
ttaacacgctttgctaagcaaaaccatatcgctatgttcattgtaggtcatgtaaccaaa
gacggtaacttagcggggccgaaagtactcgaacactgtatcgacagttcgatgatgctg
gaaggggaaagtgatggacgttaccgtacgcttcgaagtcataaaaaccgttttggtgcg
gtaaatgagctcggtgtatttgcgatgactgagaagggcctaaaagaggtgagtaatcct
tctgccattttcttaagtcgaggagacaacgaaacgccggggtcgagcgtgatggtaatt
tgggaaggcacacgcccgctacttgtggaaatacaggcactagtggattactcgcaaatg
tctaacccaagacgaatagctgtggggttggatcaaaaccgtttatctatgctgttagca
gtacttcaccgtcatggcaacgtgcaaatgaacgaccaagacgtgtttgtgaacgtagtg
ggcggtgtacgtgtttctgagaccagtgcggacttggctttgctcttagcgatgatttct
agctttcgaaatcgctccctgcctcgtgacttaattgtgttcggtgaagtagggctcgcc
ggtgagattcgtccagttcccaatggaacggaacgcattatcgaggctgcgaaacatggc
tttaagcgtgcaatcgtgcctaaagctaatgcacctaagcaagccattaatggcatgaaa
gtggtaccggtagcgcgtttatccgaagcgctagacgcgctggagtaa
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