Alteromonas macleodii Black Sea 11: AMBLS11_12290
Help
Entry
AMBLS11_12290 CDS
T02260
Name
(GenBank) antifreeze protein
Organism
amk
Alteromonas macleodii Black Sea 11
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Peptidase_S74
Phage-tail_3
Motif
Other DBs
NCBI-ProteinID:
AFT79031
LinkDB
All DBs
Position
complement(2893574..2900560)
Genome browser
AA seq
2328 aa
AA seq
DB search
MPPAAAAVAGGIIAGVVTSSALIGVAVGLGTMALSEAIKPEIPKIEESVESSQRLQTSAV
APRRGIYGETVISGTIVGYGKAIRQGPDRIIYGIDFDLLDEEVEAHVLAIAIAGHEVDSL
EIHEVNGKPADDAGAVVQYYKGDQTEASDKLKRMIPEWTDKHIGHGIAYAVVEIPINPET
LPQGLQRVTFKTRGRKVYDPRLDSTVGGEGTHRANDPTTWQWSDNPILCALDYMRFFGYR
EVPISRFYLSEIMEQADICDEEVTITDADGIETVERRFTANGFWSFDEGPAEVLTRILNS
CGGRPHRIGGKISLRTGGYSGIPQVTILESDLRGDVKYRPFTPVRDRTNAVRATYVEPEA
GYVMSEAPVVTKTEYQTADGGYRESELRLPFTNKVTRAQRLQKMHLERLRAGFVLETEIG
SKGLLLTSGMPVKIKLDRDNIDRQFVISSWKYNIKKKTVSIVAQIDYPEIWTDDINALVK
RPQIVIPDNTDPGKITGASFVETSEDTWRIGYLNIESQEHSRFISYEVKIAKANKELIPG
QAYTSATPQINVSGLSATTYGAFIRAKAANNRWTKEVFVTFTIGAVWEPEPGPPGPQGPQ
GPAGPQGVQGPVGPEGQAKYTWIRYADDGNGNGISNSPTGKEYIGFAYNKDTATESNTPS
DYTWSKIKGETGPQGPQGVEGPKGPNGEPTYTWIKYSANADGSNPTEEPVLTTKYIGIAT
NKTTQTESSNPADYTWSRFKGEQGDQGPQGPQGPQGPQGPQGVQGPVGPDGKTYYTWIKY
ADDASGTGLSNSPTGKEYIGFAYNKLTATESTNAADYTWSKIKGEKGNTGATGPTGPNGK
TFYTWIKYSANANGAGMTDTPQSNTEYIGIAVNKESATESSHAADYTWSLFKGPQGETGK
TGNQGPRGAGVYFGTTTGTTWSDSIANAATDGANVEGDHVTITNKSAGYVETRRWTGSAW
STDVGTVVDGNLVVNGYAIAEQIFSRQVNVTDRVIAETNESTVYLSAVDDFAFYAARNGK
TIFAVGSNARDIVDGNALRPSSVKAESLDESVYQAIKDTIGEAAPSTGGVKTSSMRIRSA
QVGQAIASSEGFPHGVSDITMNISFDGLVRTTTDPGYLQFTIKIQHKEQGATAWTDNATY
TCTAISNYEKEAGEYYSQFDFRAEKVINPAQGTYDFRVVLDAADSQINGSVAGTLKISEV
AAGSSIAWEKITGKAETATRWPSITEVSGGATSQSFAFDGPTSVNDLKAMTFRDDNSQGV
VGITKHTDDWIRWRFGGTGDILGIQLSNYDTPGIYLSRHGWASFTADEGVTIQSRTNGAG
ARLTFSDNAGNNYAQKGFIEYFHSDGAVGTGANDGFVIGGTEANTVVRINGRLDVGTETV
YHTGNKPSKADVGLSRVENRAFNWQWGSGTPTHIWGSQGNSTEQYVYTPNDIRDAMDIRW
SDIQNLPKIVYYGGANAAQLNDANFETSIRDISSNEAPNIGLAGDWYHVINMAHQNSNGY
GAQIAVRFQGTNPEMRFRSAEGTTFGSWATVYHTANKQDHVPTLGTVTEMPINRNVLNSG
VHTYGTRNTTTNAPHSSKYGESIVWGNGGKGAIELWGGWVAGGWGRLYTRALRDTTDSWS
DWYEVYTSREPRLRAILGVNTYTGMAAPDGNDGNWIRTTVNGLIPYQSGGASNLGTSSWP
FNNVHSSNIFAYSQIAIDSAGHANFIIDRGTTSHDANIMFRTAGSTKWRLWLDGSDTELT
FRHEASGNQPLKITENNVEVSNLNLIGGVGRLRVNTSGTIAGANFDNGWLQVGDSANGWA
IDPNEIYSTGTGIIGTISGDLQLRPSGYVDIKGSKLTAGDSGALRIQSATGYIDVGSKNT
SYAHFYTDRTKYYFDKEVYVDGAIRVYNTASQFTGDGNHALVGPNWDYYARYSNNGKIAR
KNAGWANNTAERYIFDSSWASHIGDHIVLHATGNIATNGALVMGREGFAIGRHDYTNLNP
TSLREVFSTATWMAVTPATLAFLNKEAIRFSDSWLRINEDQAFSSGIYCGGSTLRTDGNL
QVGSSGSAFNANTGQIDLKVTTRVHGVMHVKEIRSQDGNFTTIGTGELGNSLYGHVTSVH
GAANEGVHIGGESGVYLYSHSNNMSGGMDASYSIRILASDGGSYINHLDVYKTQNNARQV
VARFRHPSQNTNIAIVSKNQENGSFRIEANAEGQDLRIQTANTAGDYNTSNGIGTIARFY
RNGSAYIAGELSTADTRARSDIRVKANLSKIDKALEKVSALTGFTYDEINLKRRMASVIA
QDVEKVLPEAVGEDSDGMLNVSPLALIGLLVNAVKELSEEVKEIRKAA
NT seq
6987 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagcagccgccgccgtcgcaggcgggataatcgccggagtagtaacaagtagc
gccctaataggcgtagccgtaggcttgggaacaatggcactaagcgaagccattaagccc
gagataccaaaaatagaagaatccgtagaatcatcacaacgcctacaaacaagcgctgta
gcgccgcgtcgcggcatatacggcgaaaccgtaatttcgggaacgatagtagggtacggt
aaagcaatacggcaaggccccgaccgcataatctacgggatagacttcgacctactagac
gaagaagtagaagcccacgtactcgctatagcgatagcaggccacgaagtagatagccta
gaaatacacgaagttaacgggaaaccagccgacgacgccggagcggtagtgcaatactac
aagggcgaccaaaccgaagcatcagacaaactcaaaaggatgatccccgagtggactgat
aagcacataggccacggcatagcctacgccgtcgtagaaatcccaatcaaccccgaaacg
ctaccacagggcctacaacgcgtaacctttaaaaccaggggccgcaaagtatacgaccca
cgactagatagcaccgtaggcggggagggaacgcaccgagccaacgaccctacaacatgg
caatggagcgataacccaatactttgcgccctagattacatgcgcttctttggctacaga
gaggtgcctatctcgcgtttttacctaagcgagataatggagcaagccgatatatgcgac
gaagaagtaaccataaccgacgcagacggcatcgaaaccgtagaaaggcgattcacagca
aacggcttctggtctttcgacgaaggccccgccgaagtgctaaccaggatcctaaatagc
tgcggaggtagaccccatagaataggcggtaaaatctcgctacgtaccggcggttacagc
ggtataccacaagtaacaatcctagaaagcgacttgcgcggcgacgttaagtacagacca
tttacacccgtaagagacagaacaaacgcggttcgcgctacctacgtagagccagaagca
ggctacgtaatgtccgaagcgccagtagtaacgaaaaccgagtaccaaaccgccgacggt
ggctacagagaaagcgaactacgcctaccattcactaacaaagtgaccagggcgcagcgc
ctacagaaaatgcacctagagcgtttacgggcaggcttcgtattagaaacagagatagga
tccaaaggcttactactaacaagcggtatgccggtaaagataaagctagaccgcgacaat
atagaccgccaattcgtaataagcagttggaaatacaacataaagaaaaagaccgtatca
atagtcgcccaaatcgactaccccgagatatggactgacgacataaatgcgctagtaaag
cgaccgcaaatcgtaatccccgataatacggatccaggaaaaatcaccggcgcttcattc
gtagaaacttcagaagatacctggcgcataggctatctaaacatcgaatcgcaagaacac
agccgattcataagctacgaagtaaaaatagcaaaggccaataaggaactaataccaggg
caggcttacacaagcgctacaccgcaaataaacgtatctggtttatcagctaccacctac
ggcgccttcataagagccaaagccgcaaacaaccgatggactaaggaagtttttgtaact
ttcaccataggcgcagtatgggaacccgagccagggccgccagggccacaaggcccccaa
gggccagcaggcccacaaggggtgcaggggccagtagggccagagggccaagcaaagtac
acttggattcgctacgccgacgacggcaacgggaacggcatcagcaacagcccgaccggc
aaagagtacattggtttcgcctataacaaagatacagcgacggagagcaacaccccgagc
gattacacttggtcaaagattaaaggagagacagggccgcaggggccgcaaggcgtagag
gggccgaaagggcctaacggagagccaacctacacttggattaaatacagcgcaaacgcc
gacggcagcaacccgacggaagaacccgtattaactacaaaatacatcgggatagctacc
aacaagacaacgcaaaccgaaagcagcaatccagcggattacacctggtcacgctttaaa
ggtgagcaaggcgaccaggggccgcaagggccacaggggccacaggggccacaagggccg
caaggtgttcaagggccagtaggcccagacggtaaaacctactacacctggattaaatac
gcagatgatgcaagcggaacgggcctaagtaacagccctacgggtaaagaatacataggc
tttgcgtataacaagttaaccgctacagaaagcaccaacgccgcagactatacctggtca
aagataaaaggcgaaaaaggcaacaccggcgcaacaggcccaacagggccaaatgggaaa
acgttctatacgtggattaaatatagtgccaacgctaacggcgcaggcatgaccgacacg
ccgcaaagcaacacggaatacattggtattgcggtaaataaagagagcgccacagaaagc
agtcacgccgcagattacacctggtcactattcaaagggccacaaggggaaacgggcaaa
accggcaaccaaggcccaagaggggcaggggtttacttcggtaccactaccggcaccaca
tggtcagattcaatagctaacgcggcaaccgacggcgctaacgtagagggcgaccacgta
accattacaaacaagtcagcaggctacgttgaaacccgccgatggacgggtagcgcatgg
tctacagacgtaggcaccgtagtagacgggaacctagtagtaaacgggtacgcgatagcg
gaacaaatattctcgcgccaggtaaacgtaacagaccgagtaatagcagaaaccaacgaa
tcaacggtttatctatcagccgttgacgatttcgctttctacgcggccaggaacgggaaa
actatttttgcggtgggatccaacgcccgagacatagtggacggtaacgcactacggcca
agttcagtaaaagccgaatcgctagacgaatcggtataccaagcaataaaagacacgata
ggcgaagcagccccaagcaccggcggcgttaaaacttcttctatgcgtataagaagcgcc
caagtaggccaggcaatcgcttctagtgagggtttcccccacggcgtaagcgacataaca
atgaatatttcatttgacggccttgtaagaacgaccacggatccaggctacctacaattt
acaataaaaatccaacataaagagcaaggcgcaacagcatggacggataacgcaacttat
acctgtacggctatttctaactacgaaaaagaagcaggcgaatactattcgcaattcgac
tttcgagccgaaaaggttataaatccagcccaaggtacctacgatttccgcgtagtgcta
gacgcagcagacagccaaataaacggcagcgtagccggtactttaaagatttcagaggtt
gcagccggttcctcaatagcctgggaaaaaataacaggcaaagcagaaacagcgacacgc
tggccgtcaataacagaagtgagcgggggagctacaagccaatcatttgcattcgacggc
ccaacatcagtaaacgaccttaaagcaatgacgtttagggatgataactcgcaaggcgta
gtaggcattaccaagcacaccgacgattggatccgttggcgctttggcggtaccggcgac
attctaggtattcagctttcaaactacgacacgccaggcatttatttatctcgccacggt
tgggccagctttaccgccgacgaaggtgtaacgattcaatcaaggacaaacggcgcaggc
gctaggcttacgttttcagataacgcaggcaataactacgcgcaaaaaggatttatagaa
tacttccacagtgacggcgcagtaggtaccggcgcaaatgacggctttgtaattggcggc
acagaggccaacacagttgtaagaatcaacggtcgcctagacgtaggcacagaaacggtt
taccacacagggaacaagccgagcaaagctgacgtagggttaagccgagtagagaaccga
gcgtttaactggcaatggggcagcggcacacctacccatatttggggttcacaaggcaat
agcaccgagcagtatgtgtatacgcctaacgacatacgcgacgcaatggatatcagatgg
tcagatattcaaaacctaccgaaaatagtttattacggcggggctaacgccgcacagcta
aacgacgcaaactttgaaacaagcataagagatataagttcaaacgaagcgccaaacata
ggattagcgggcgattggtaccacgtaataaacatggcgcaccaaaacagcaacggctac
ggggcgcaaatagctgtaaggttccagggaaccaaccccgaaatgcgtttcagaagtgca
gaaggcacgacgtttggtagttgggccactgtttaccacacggccaacaagcaagaccat
gtacctacccttggtaccgtaaccgaaatgccgataaatagaaacgtgctaaatagcggt
gttcacacctacggaactagaaacaccactaccaacgcgccgcattcttccaagtacggg
gaatcaatcgtatggggtaacggtggcaaaggcgcaatcgaattgtggggcggttgggtt
gcaggcggttggggccgtctatatacccgagcgctacgagatactacggatagttggtca
gattggtacgaggtatatacaagccgagaaccacgcctacgagcaatattaggcgtaaat
acctatacaggtatggcagcccccgacggcaacgacggaaactggatccgaaccactgta
aacggattgataccgtaccaatcaggaggagcgagcaacctaggcacttctagctggcct
tttaacaacgttcattcatcaaacattttcgcatactcacaaatcgcaatagattcagca
ggtcacgctaactttatcatcgaccgtggaacaacatcgcacgatgcaaacataatgttt
agaacggcgggttccaccaagtggcgtttgtggttagacggcagcgatacagagttgaca
tttagacacgaagcaagtggcaatcaaccgttaaagataactgaaaacaatgtagaagta
agcaacctgaatctaataggtggggtaggaagattaagggttaataccagcggcaccata
gccggagcgaactttgataacggctggctacaagtaggtgactctgctaacggatgggcg
attgaccctaatgaaatttattccacaggaacggggataataggcactattagcggtgat
ttgcagctaagaccaagcggctatgttgatattaaaggctctaaactaaccgcaggcgat
tcaggagcattacgtattcaaagcgctacgggctacatagacgtaggctcaaagaatact
agttacgcccatttctacacagaccgaacaaaatactattttgacaaagaagtatatgta
gacggggcaataagggtatataacaccgcttcacaatttaccggtgatgggaatcacgcc
ttagtaggccccaactgggattactacgctaggtattccaacaacggaaagatagctaga
aaaaacgcagggtgggccaataacacagcagaaagatatatttttgactctagctgggcc
agccacataggcgaccacatcgtattacacgccacaggaaatatagccaccaacggtgcg
ctagtaatgggtagagaaggcttcgcaatagggcgacacgactacacgaacctaaaccca
acgagcctaagagaagtgttttcaaccgctacctggatggccgtaacaccggcaacgcta
gcttttttaaataaagaagcaattaggtttagcgattcttggttacgcataaacgaagat
caagccttttcaagcggcatctattgcggtggttcaactttaagaaccgacggtaatcta
caggtaggttcaagcggtagcgcatttaacgctaatactggccagatagaccttaaagta
acgacccgggttcatggcgttatgcacgtaaaagagatccgttcacaggacggtaatttt
accaccataggtaccggcgagttaggtaacagcctatacggccacgttacaagcgtacac
ggtgcagccaacgaaggggttcatattggaggagaaagcggcgtttatttgtattctcat
tccaacaatatgagcggagggatggacgcttcctattcgataagaatactagccagcgac
ggcggttcgtatataaaccacctagacgtttacaaaactcaaaacaacgctagacaggta
gttgcaaggtttagacacccaagccaaaacaccaacatagcgatagtttcaaagaaccag
gaaaacggctcgtttagaattgaagccaatgcagagggccaagacctacgcattcaaacc
gcaaatacagccggtgactacaacacttccaacggcataggaacaatcgcgagattttac
cgaaacggtagcgcctacatagcaggggaactttcaacagccgacacccgagcgcgttca
gacattagggttaaagcaaacctatctaagatagataaggccctagagaaagtaagcgct
ctaaccggcttcacctacgacgagataaacctaaaacgccgcatggcatcggtaatcgcc
caggacgtagaaaaagtgctacccgaagcagtaggcgaggacagcgacggaatgttgaac
gtttcaccgctagcgctaatagggctactcgtaaacgccgtgaaagaattaagcgaagaa
gtaaaagaaataaggaaagcagcttaa
DBGET
integrated database retrieval system
