Alteromonas macleodii Black Sea 11: AMBLS11_14900
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Entry
AMBLS11_14900 CDS
T02260
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMBLS11_14900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amk02000
]
AMBLS11_14900
Transporters [BR:
amk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AMBLS11_14900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AFT79549
LinkDB
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Position
3486828..3488111
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AA seq
427 aa
AA seq
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MPSNTDKNVASSKLRRTLLKGGLAFGLTAGVTPFSIGKEKPTLRVLGTHVTLQEAIRQRA
MEDLGISIEFEAGGSATVLQKASMNPASFDLYEQWSNSINVLWRAHAIQPIEKKRLLYWE
EINDLSKTGKLTKNARMGAGDAPHKIINVQDDGTLGANHTDTISFLPYVHNVDSFGYDTT
KLPQELKGQEESWGWLLDSRYSGQVGIVNDPTIGLFDLALAAQAKGFIQFQDIGAMTEYE
LDDLFSLLIELTQLNHFNGFWNSVPESVEFMKSGRVAIESMFSPAVSALNGQDIPVTFAA
PKEGYRGWHGVMCLSSASQGRMKDVAYEYMNWWLSGWPGAFIARQGYYISNPKRSAQYLS
DAEWNYWYKGQVASEPLKGPDGNISVRKGAQRTGGSYEERFSNVAVWNTVMPTYEYSLQK
WYEFITA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaaacaccgataaaaacgttgcttcatctaagctgcgccgcactttattgaaa
ggtggcctcgcttttggcctaaccgcaggcgttacccctttttcaataggcaaagagaag
cctacactgcgcgttttgggtacccacgtaacgctacaagaggccattcggcagcgagct
atggaagacttaggcattagtatagaattcgaagcaggtggcagcgcaaccgttcttcaa
aaagcatcgatgaaccccgcatcttttgacctatacgaacagtggtccaatagcataaac
gtactgtggcgagcgcatgcaattcagcccattgaaaaaaagcgacttctgtattgggaa
gaaataaacgatttaagtaaaactggaaagctgaccaagaatgctcgaatgggcgctggc
gatgcgcctcataaaatcattaatgtgcaagacgatggcacactcggtgctaaccatacc
gacaccattagttttttaccctacgtgcacaatgtcgactctttcggctatgacactaca
aagctaccccaagagttgaaagggcaagaagaaagctggggctggcttttggacagtcgc
tattcaggacaagtgggtatagtcaacgaccccacaatcggcctattcgacctagcactt
gccgcccaagccaaaggtttcattcaatttcaagacattggggccatgacagagtatgaa
cttgatgatctgtttagcttgctcatcgagttgactcaactcaatcattttaatggattt
tggaactcagttcccgagtcagtcgagtttatgaaaagcggtcgagttgctattgaaagt
atgttctcaccagcagtctctgcgttaaacggtcaagacattccagtcacttttgcagcc
cctaaagaaggctaccgtggctggcacggcgttatgtgcctttcctcagcatcacagggc
cgaatgaaagacgtggcttatgaatatatgaattggtggctgtcaggatggcctggcgca
tttattgccagacaaggctattatatttctaaccctaaacgttcagctcaatatctttca
gacgccgaatggaattactggtacaaagggcaagtagcatcagagccgcttaaaggcccc
gatggaaatataagtgtaaggaaaggagcccaacgaaccggtggcagttacgaagagcgt
tttagtaatgttgctgtatggaatactgttatgccaacctatgagtacagtttgcaaaag
tggtacgaattcattaccgcatga
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