Alteromonas macleodii Black Sea 11: AMBLS11_16035
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Entry
AMBLS11_16035 CDS
T02260
Name
(GenBank) putative DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk03030
DNA replication
amk03430
Mismatch repair
amk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMBLS11_16035
03430 Mismatch repair
AMBLS11_16035
03440 Homologous recombination
AMBLS11_16035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amk03032
]
AMBLS11_16035
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_16035
Enzymes [BR:
amk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMBLS11_16035
DNA replication proteins [BR:
amk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMBLS11_16035
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMBLS11_16035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AFT79776
LinkDB
All DBs
Position
complement(3776463..3777089)
Genome browser
AA seq
208 aa
AA seq
DB search
MRDKKLCSTPLASVDLELTSLDPLTTQITSIGYVSGSAGKIALSSSGYHVINTSADLGQS
PVIHGLTLDILQQGEGIKEALKSLIPLLESHVLIFHNARLDLMALNSAFKRCELPKVDVV
YIDTLQLALYQLNKQHQVLPSNSATLTVCRQRLGLPAFPERNALDDALATLQLFYAQLNE
LGITLEDSIESLFHTNAVGRFSLGLSSS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgacaaaaagctgtgtagcacgcctttagcgtcagtggatctagagctaacttct
ttagaccccttaacaacacaaatcacatcgattggatatgtaagtggttctgccggaaaa
attgcgctttcttccagtggttatcacgttataaatacctcggcagatttggggcaaagc
cctgtgatccacgggttgaccctggatatattgcagcaaggtgaaggtattaaggaagcg
ttgaagtccttgatacctttgttagaaagccatgtattgatttttcacaatgcgaggttg
gatttgatggcactcaatagtgccttcaagcgctgtgaattacctaaagtcgacgtcgtt
tatatcgatacccttcagcttgcactttatcagctaaataaacagcatcaggtattaccc
agcaatagcgcgacacttaccgtttgtagacaacgtctggggttacctgcatttcctgaa
cgcaacgcgttagacgatgcgttagcaacgctacaactgttttacgctcagctgaacgaa
ttgggaattacgctggaagattctatcgaatctttatttcatactaatgccgtgggacgt
tttagccttgggctttcatcttcatag
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