Alteromonas macleodii Black Sea 11: AMBLS11_16695
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Entry
AMBLS11_16695 CDS
T02260
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMBLS11_16695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_16695
Enzymes [BR:
amk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMBLS11_16695
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMBLS11_16695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
PriA-like_WH
AAA_30
AAA_19
Zot
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AFT79908
LinkDB
All DBs
Position
complement(3940841..3943030)
Genome browser
AA seq
729 aa
AA seq
DB search
MAFIQVAVPVPLRQLFTYTHDNALSAGVRVVVPFGPRKLVGVVVETLHKAESEIDNANKL
KAVESVLDNTPIIDNVLLKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAAPTPQDMLML
TEEGKQTAAATLSRAPKQQACFAALAGGALLASQARKQYGAPAVKALVEKSLISIEEVAP
EFKSGSWLASLSVSEKPIPDTEQSVAIAALNRQQGNFAVSLLEGVTGSGKTEVYLQAIEP
LLREGKQVLILVPEIGLTPQTVSRFEKRFGIAVGVLHSQLSDKERLQVWQRAKAGELGII
IGTRSAIFTPLHNPGMLIVDEEHDESFKQQDGLRYHARDLAAMRAKQHNIPLLLGSATPA
LETLNNALSGRYAHLQLTKRAGGAKSTHQHVLDARDQPIHYGISQGLLTIMRQHISAGNQ
VLVFVNRRGYAPALLCHHCGETVMCKRCDRPYTVHKAQNRLQCHHCGGMRSMPSNCEACH
HIELVTAGTGTEQVEQGLTSLFPGVKQVRIDSDTVRGKDKLHQTLDAINRQEYQLLVGTQ
ILSKGHHFPHVTLVAVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWLQTHN
PHHPLLQDLVHNGYGHFARHALMERKAAGLPPFISQFVIRAEATDSSLAYRFLQDSKQVF
YQQHAIELNGPFPCLIEKRQGRFRFMLVCSHEKRAPLHNALRLALPFLQALPQAMKVRWS
IDIDPTDFS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcctttatccaagttgccgtgccagtgccactgcgccaacttttcacatatacccac
gataacgcacttagtgcgggtgttagagtggttgtgccttttggcccgcgcaaactcgtg
ggcgttgtcgttgaaacactacataaagctgaaagcgaaattgacaatgccaacaagcta
aaagccgttgagtcagttctagacaataccccaattattgacaatgtattgctgaaaatg
gctcagtggttgtggcagtattatcatcatgcgccaggtgaggtgctgcacgccatgctg
cctgttttattgcgcaaaggcgagtcagcagcgccaacaccccaagacatgctaatgctt
accgaagaaggtaaacaaacggctgcagccacgttatcgcgggcgcctaaacagcaagcg
tgttttgctgcactggccggtggtgccttattagcatcccaagcgcgcaagcagtatggg
gcacctgcggtcaaagcacttgtcgaaaagtcattgataagcattgaagaagtcgcgcct
gaatttaagtcaggcagttggcttgcctcgctatcggtgtctgaaaagccaattccagat
actgagcagtcggttgccattgccgcgctaaaccgtcagcagggcaacttcgctgtaagt
ttgcttgaaggggttaccggtagcggtaaaacggaagtgtatcttcaagctatcgaaccc
ttgctgcgtgaagggaagcaagtgcttatacttgtgccagaaattgggcttacgccgcaa
acggtgtcacgctttgaaaagcgctttggtattgcagtgggcgttttacactctcagctc
tctgataaagaacggctacaagtatggcagcgagcaaaagccggtgagctcggtattatc
attggtacccgctcggctattttcaccccgctgcacaaccccggcatgttgattgtggat
gaagagcacgacgagtcttttaaacagcaagatggacttcgctatcatgctcgtgatctg
gcggccatgcgtgccaagcagcacaatattcctcttttattaggtagcgccacgcccgca
cttgaaacacttaataatgcgctaagcggtcgctatgcccatttgcagttaactaagcga
gcaggaggtgcaaaaagcacgcatcagcatgtgctagacgcgcgcgatcaacctatccac
tatggtatttcgcaaggcctgttaacgataatgcgccaacatattagcgcgggtaatcag
gtattggtgtttgtgaatcgcagaggctatgcgccagcgctgctttgccatcactgcggc
gaaaccgtcatgtgtaagcgctgtgaccgtccttatactgtgcataaagcgcagaaccgt
ttacagtgtcatcactgcggcggtatgcgctctatgccatcaaactgcgaagcgtgccat
cacattgagttagttacagcgggcacagggaccgagcaagtcgagcaagggcttacaagc
ttatttcccggtgttaagcaggtacgaatagacagtgataccgtgaggggcaaagacaaa
ctgcaccaaacactggatgcgataaaccgccaagagtaccagctgctagtaggtactcag
atactgtcaaaaggtcaccatttcccgcatgtaactttagtggcggtgctagattgtgat
ggtgcactttttagtgccgattttagagcaccagaaaagcttgctcagcttgttactcag
cttgcaggaagagcagggcgcgccagtaaaccaggggaaatgtggttgcaaactcacaat
ccccaccatcctttgctgcaagatttagtgcataacggctatgggcatttcgcaagacac
gctttaatggagcgtaaagcggcagggcttccgccttttattagtcaatttgtgatccgc
gctgaggcgaccgacagcagcttggcctatcgctttttacaagacagtaagcaagtattt
taccagcagcatgccattgagttaaatggcccgtttccttgtttgattgaaaagcggcaa
ggcaggtttcgatttatgctggtttgcagtcatgaaaagcgtgcgccgcttcacaatgcg
ctgcgcttggcactgccatttttacaggcgttgccacaggcgatgaaagtaaggtggtcg
atagatattgatcctaccgatttcagttag
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