Alteromonas macleodii Black Sea 11: AMBLS11_17810
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Entry
AMBLS11_17810 CDS
T02260
Name
(GenBank) ada regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMBLS11_17810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amk03000
]
AMBLS11_17810
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_17810
Enzymes [BR:
amk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AMBLS11_17810
Transcription factors [BR:
amk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AMBLS11_17810
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMBLS11_17810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
DUF6233
SAYSvFN
DUF3196
AbiEi_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AFT80127
LinkDB
All DBs
Position
complement(4192641..4194020)
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AA seq
459 aa
AA seq
DB search
MLAKARLSRDPRFDGRFFVAVKTTGIFCRPICPARLPKEENVTYFQHATQAMAQGYRPCF
RCRPDSAPRSAAWKGVGATINRALSLLSVIPVERVADIAARLGISERYLNKLVVNAVGIP
PKQFQNMQRALFAKQLIQQTHLSMTDVAITAGYQSLRQLQRAIEQYCATSPTQLRKKEPV
QQKTISLFLSYRPPYNWPYVRDFLATRAIEGMERVTQESYERYFSCKENLGFFKAVHDDV
RHGFKLFIDLSDLSSLHTTVENIKQVLDLHADPLLIEQSLVQSGLSPEKLTSGLRLPSAW
SVFESGCRAIVGQQVSVKAAIGQVTLLVHQLGETVSDALPSNGLESTTSERYSFPSPESV
AENSLEFLRMPQARKEAVRHFARLFINGNMPSHEDILAIKGVGPWTLDYLKMRGERNPDV
YLGGDLIVRKMAQQYPIAPEKAAPWRSYLTLQLWQLSSQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgaaggcaagattgagtagagatccgcgctttgacggacgattttttgtggcg
gtaaaaacaaccggtattttttgcagaccaatttgcccggcgagacttccgaaagaagaa
aacgttacttactttcaacacgctacacaggcgatggcacaaggttatcgcccgtgtttt
cgctgcagacccgacagtgcccctcgctctgctgcgtggaagggcgtgggcgcaacgata
aatcgagcgttgtcgctactatctgttattcccgttgagcgcgtagctgatattgccgct
cggttgggtattagtgagcgttacttaaataagctggttgttaatgcagtcggcataccg
cctaaacagtttcaaaatatgcagcgcgctttgtttgcaaagcagcttattcaacaaacc
catctgtctatgacagatgtggcaataacagcaggctatcaatcactgagacaattgcag
cgggccatcgagcaatattgcgctacctctcctacccagcttagaaaaaaagagccggtt
caacaaaagactatttctttgtttctgtcttatcgaccgccgtataactggccctacgta
cgagatttcttggcaacccgtgcaattgaaggcatggagcgagtaacacaagagagctac
gagcgttatttttcatgcaaagagaacttaggcttttttaaagccgtgcatgatgacgta
cgccatgggtttaaacttttcatcgacctgtctgatttaagcagtcttcatacaaccgtt
gaaaatataaagcaggtattagaccttcacgccgacccgcttttaattgaacaaagctta
gttcagtctggattatcgcccgaaaagttaacatctgggctacgccttcctagcgcatgg
agtgtatttgaaagtggctgtcgcgctattgtaggtcagcaggtaagtgtgaaagcggct
attggccaggtgactttactggtacatcagctgggcgaaacggtctctgatgcgctcccg
tcaaacggtcttgaatctacaactagtgaacgctacagctttccctcgcctgaaagtgtg
gccgaaaacagtcttgaattcttacgtatgccacaggcgaggaaagaagccgtacgtcat
tttgctcgtttattcataaacggtaacatgccaagccatgaagacatactcgccattaaa
ggcgttggcccgtggacgctcgactatttaaaaatgcggggggagagaaatcctgacgtc
taccttggcggtgatttaatcgttcgtaaaatggcgcagcagtaccccatagcgcccgaa
aaagcggcaccttggcgcagctatctaacccttcagttgtggcagttaagcagtcaataa
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