Alteromonas macleodii Black Sea 11: AMBLS11_19005
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Entry
AMBLS11_19005 CDS
T02260
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amk03016
]
AMBLS11_19005 (trmE)
Transfer RNA biogenesis [BR:
amk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AMBLS11_19005 (trmE)
Prokaryotic type
Methyltransferases
AMBLS11_19005 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
AIG1
ABC_tran
SRPRB
Gtr1_RagA
Arf
AAA_18
Roc
DUF5129
AAA_28
MMR_HSR1_Xtn
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFT80362
LinkDB
All DBs
Position
complement(4476230..4477618)
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AA seq
462 aa
AA seq
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MESLTLSTDTITAQATAPGRGGVGIVRVSGPKAKAIAEALVPSALTPRLATYTPFVDANN
SVIDQGIALFFKGPNSFTGEDVLELQGHGGQVVMDMLIDAVLATGHARLANPGEFSEQAF
LNDKLDLAQAEAIADLIDASSKQAAKSALRSLQGEFSTQIQTLSDQIVHLRMYVEAAIDF
PEEEIDFLSDGKVSGDLSAIMQSLTKVREQAKQGTLLREGMQVVIAGRPNAGKSSLLNAL
AGRDSAIVTDIAGTTRDVLKEHIHIDGMPVHIIDTAGLRESPDKVEQIGIERAWQAINEA
DHVLFVVDSTATVVIDPYEIWPEFMARLPQGIPVTVVRNKADLSTLDIGQSTVATEQGEI
SVINLSAKEGSGVDTLKAHLAKTMGFDTTTEGQFIARRRHIDALDQAYSYVSTGEQQLHD
AMAGELLAEELRLAHQALCEITGEFTSDDLLGKIFSSFCIGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaatcactcaccctttctaccgacactattaccgcacaagcgacagcgcccggtcgt
ggcggcgtaggtattgtgcgtgtttcaggtcctaaggccaaagctatcgcagaggcgtta
gtaccaagcgcactaacaccacgtcttgcgacctatacgccgtttgttgatgccaacaac
agcgtaatagaccagggcatagcactgttttttaaagggcctaactcatttaccggtgaa
gatgtacttgaactgcagggccacggcggtcaagttgtcatggacatgctgattgatgcc
gtgcttgcaacaggccatgcccggcttgccaatccaggtgaattcagtgaacaggccttt
ttaaatgataagttagaccttgcgcaagcagaggcgattgccgacttgattgatgcaagc
tctaaacaggcagccaaaagtgcgctgcgctcgctacagggtgagttttctacacaaatt
caaacgctatctgaccaaatcgtgcaccttcgtatgtacgtagaagcggccatcgatttt
cctgaagaagaaattgatttcttatctgatgggaaagtatcaggtgacttaagcgcaatc
atgcaaagcttaaccaaagtacgcgaacaggctaaacaaggtaccttgttgcgcgaaggt
atgcaggtggtgattgcggggagacctaacgccggtaaatcgagcttattaaacgcccta
gcaggacgagatagcgccattgttactgatatcgctggtaccacgcgagacgtgcttaaa
gagcatatacacattgatggtatgccggtgcacattatcgacactgctggacttcgagaa
agcccagataaagtggaacaaattggtattgagcgcgcgtggcaagccattaatgaagct
gatcatgtgttatttgttgtggactctaccgcaaccgttgtgatcgacccttatgaaata
tggccagaatttatggcccgattgccacaaggtatccccgttaccgtagttcgtaacaag
gccgaccttagtaccttagatattggacaaagcacagttgccaccgagcaaggtgaaatc
tcagtcattaatctatcagccaaagaaggtagcggcgtcgacacgctaaaagcacatctg
gcaaaaaccatgggcttcgatactacaactgaaggtcaatttatcgcgcgcagacgacac
atagacgcactcgaccaagcctacagttatgtaagcacaggcgaacaacaactgcatgac
gctatggcgggtgagttgcttgctgaagaattgcgcttggctcaccaggcactatgtgag
ataaccggtgaattcacgtcagacgacctacttggtaagattttttcatcgttctgtatt
ggtaagtag
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