Ailuropoda melanoleuca (giant panda): 100463622
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Entry
100463622 CDS
T01329
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X5
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100463622 (CHD9)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100463622 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
100463622
NCBI-ProteinID:
XP_011214888
Ensembl:
ENSAMEG00000016232
UniProt:
A0A7N5KLU4
LinkDB
All DBs
Position
12:51666705..51884921
Genome browser
AA seq
2426 aa
AA seq
DB search
MSSVKRPRGRPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAI
AKAKERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKRTKTCSKLKEKAKI
GKLIITLGKKQKRKNESSDEISDTEQMPQHTCKEEDSQKRRSNRQIKRKKYAEDAEGKQS
EEEVKGSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEVSPGVMIDTE
EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE
VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDT
RHLDRPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQ
SITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMY
FRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLK
LMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAIL
KPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLV
NTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKM
KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF
LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYER
EMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKF
CEEDIDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDI
DAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTE
CFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIW
DLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDE
GYKKHIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDANDIDVWVPEPDHSEVPAEW
WDFDADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVED
PEYKPAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQR
TNKNRQIQQIQPTFSAPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFG
VVFDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQ
PITEERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGA
AKHGVSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRL
LDAKGIILEDMKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKS
GGKGETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSESDSDSERSSCSSRSSSSSSSS
SSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEDSDSEEDEVQKRAEGTPHV
KAYDEESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSIC
QTVLKGKWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSTQ
MSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPLDSEDGALGQQQYLARLRELQSA
SETGLASFPKSMPVSGTSIQSTLGANGVRLDNQPIVKKRRGRRKNVEGVDILFFNRNKPP
NHVTLGLTTSQVSTGINPALSYPQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKW
LKEHPGYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKV
GGAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGR
RPKSGIAKATAAAAAATATSVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLM
GMPAGLSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKELEG
KKERTESQNSENGGENSVSSSPSTSSTAALSTAAAASPLALNPLLLSNILYPGMLLTPGL
NLHMPTLSQSNTFDVQKNKNSDLGSSKSQEVKEEDSRVRDQEDKGGTEASPLNENSTDEG
SEKADASSGSDSTSSSSEDSDSSNED
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtgaagaggccaagaggaaggcctccatcttccaagaagagtgatggttct
gggacgtacactaagttgcagaatacccaggtgaggatcatgtctgagaagaagcagagg
aaaaaagtggaatcagaaagcaagcaagaaaaggcgaatcggatcatatcagaggccata
gcaaaagcaaaggaacgtggggaacgcaatattccacgagtaatgagtcctgaaaacttt
cctagtgcttcagttgaaggaaaagaagaaaagaaaggtagacggatgaaatccaagcca
aaggacaaagagagcaaaagaacaaaaacttgttctaagttaaaagagaaggcaaaaatt
ggcaaactcattattacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgag
atatctgatacagaacagatgccacagcacacttgcaaagaggaggactctcaaaaaaga
agatcaaatcgtcaaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatcg
gaagaagaggttaaaggttctatgaaaataaaaaagaattcagctcctttacctggtgaa
cagcctttacaattatttgtggagaatccaagtgaagaagatgctgcaattgtagacaaa
atactatcttccagaattgtgaaaaaggaagtatcacctggagtgatgattgatacagaa
gaattttttgtaaaatacaagaattactcctatcttcactgtgagtgggccacagagcag
cagcttttgaaagataaaaggatccagcagaaaatcaaacgattcaaattgagacaagca
caaagagcacatttttttgcagatatggaagaggaaccatttaacccagactacgttgaa
gtagacagagtgttagaagtctctttttgtgaagataaagatactggtgagcctgttatt
tactacttagtaaagtggtgctcattaccatatgaagatagtacgtgggaactaaaagaa
gacgtagatcttgcaaaaatagaagagtttgaacagttacaagcttcaaggcctgacaca
agacatttggatcgtcctcccgctaatatttggaaaaaaattgatcaatccagggactat
aaaaatggcaatcaactcagggaatatcaactggaaggactcaactggctcttattcaat
tggtacaatagacgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaa
tcaattacattcctctacgaaatccttctgactggtataagaggacctttcctgattatt
gctccactttctactattgcaaactgggagagagaatttcgtacatggactgatattaat
gttgtggtttatcatgggagcctgattagcagacagatgatacagcaatatgagatgtac
ttcagggactcacagggtcgtatcattcgaggagcttacagattccaagccatcatcacc
acttttgaaatgattcttggtggctgtggagagcttaatgcaattgaatggcgatgtgtg
attattgatgaagcacataggttaaaaaataaaaattgtaaacttctagaaggtctgaaa
ctcatgaatctggaacacaaggtgcttctgactggcacacctctccaaaatacagttgaa
gaactatttagtcttcttcactttctggaacctttaaggtttccttctgaatcaacattt
atgcaagaatttggggatctgaaaacagaggaacaggtgcagaaacttcaggctatcctg
aagccgatgatgttgagacggttaaaagaagatgtggaaaagaagctggcaccaaaggaa
gaaaccatcattgaagtggaacttactaacattcagaagaaatactaccgggctattttg
gagaagaacttctcatttttatccaaaggagcagggcagaccaatgtccctaacttggtc
aataccatgatggagctcaggaagtgctgcaatcatccatatcttatcaaaggtgctgag
gagaaaatacttggagaatttagagatacatataatccagctgcttctgattttcatctt
caagcaatgatccagtctgctggtaaattggtccttattgataaattacttcccaaaatg
aaagctggaggtcataaagtgctcatcttctctcagatggtacgctgccttgacatcctg
gaggactatctcattcataaaagatatttatacgagcgaatcgatggaagagtcagaggg
aatcttcgacaagctgctatagatcgatttagtaaacctgattcagatcgatttgttttc
cttctgtgtacccgagctggtgggttgggcatcaacctaactgctgctgatacatgtata
atttttgattctgattggaatcctcagaatgacctgcaggcccaagctcgttgccacaga
atcggtcagaataaagcagttaaagtctaccgactagtaactcgtaactcatatgagaga
gagatgtttgaccgagccagtctgaaactgggtctagataaggctgtgttacagagcatg
agcggaagagaaagtaatgttggtggtattcagcagctttccaaaaaggaaattgaagat
ctgcttcgaagaggtgcttatggtgccattatggaggaagaagatgagggctctaaattc
tgtgaggaggatattgatcagattttactacgtcggacaaaaactattacaattgagtca
gaaggacgtgggtcaacatttgctaaggctagttttgtggcatctggaaatcggacagat
atttccttagatgatcccaacttctggcagaaatgggctaagaaggcagaaatagatata
gatgccatcagtggcagaaacagcttggttattgacactccaagaattaggaagcaaaca
agaccctttagcgcaacgaaagatgaattggctgaattatctgaagccgaaagtgaagga
gatgaaaagcccaaactccggagaccctgtgaccgttccaatggctatggaagaactgaa
tgctttagagtagagaaaaatcttctcgtttatggatggggccggtggagagagattctg
tctcacggtcgttttaagagacagctgaacgagcatgatgtagaaataatttgccgagcc
ctcttagcatattgccttgttcactaccgaggagatgagaaaattaaaggcttcatatgg
gatctcattactccaactgaagatgggcagacaagagagctacagaatcatctaggccta
tcagcccctgtacccaggggtcgaaaaggaaagaaagtaaagactcaaacaagctcattt
gatatacagaaagcagaatggcttcgaaaatacaatcctgagcagctacttcaagatgaa
ggatacaaaaaacatataaaacaccactgtaataaggttttgcttcgtgtaagaatgctg
tattatctaaagcaagaagtcattggaaatgagtgtcaaaaagtatttgatggagttgat
gcaaatgacattgatgtttgggtcccagaaccagaccactcagaagttcctgctgaatgg
tgggatttcgatgctgataagtcacttcttattggagtttttaaacatggttatgaaaaa
tataacactatccgagcagacccagcattatgcttcttggaaagagtgggaaaacctgat
gagaaagcagttgctgcggaacagagggcaaatgattatatggatggggacgtggaagat
ccagaatacaaacctgccccagctatctttaaagatgatatagaggatgatgtttcttca
ccaggagatcttgttatagcagatggagatggtcaactgatggaaggtgataaaatttat
tggccaactcagtcagctttaactacacgtttgaggcgtctcatcactgcatatcagcgt
actaataaaaacagacaaatccagcagatacagcctactttctcagcgcccgccagtgta
atgcagcctctttacgaagaagccactctcaatcctaaaatggccgccaagatagagaga
cagcaaaggtggacgagaagagaagaagctgatttttatagagttgtgtctacatttgga
gtggtatttgaccctgacagaggccaatttgattggacaaaatttagagctatggctagg
ctgcataagaaaactgatgatagcttggaaaagtatttgtatgcgttcatgtctatgtgt
cggagggtttgtcgtcttccttccaaagaagaattggtggatccaaatatttttatccag
ccaatcacagaagaacgtgcttctaggactttgtaccgtattgaacttctaaggaaagta
cgggaacaggccctccggcatccgcaattgtttgaacgcttgaagctttgccatccaaat
ccagacttaccagtctggtgggaatgtggccctcatgatagggacttgctcattggagct
gctaaacatggggtgagccgaacagactatcacattcttcgtgatcctgaactctccttt
atggcagctcaaaggaactacagtcaaagtaagatggctcattcaaggacttctacccca
cttttacagcaatatcaagtagcactttctgcttctcctcttacctctctacctaggctc
ctagatgctaaaggtattattctagaggatatgaaagttaaaagtgaaaatcttaaagag
gagcctcagtcttctgaagaagaatctatgtcttctgaggaaaccaggacactaataaag
tctgagcctgtaagtccaaagaacggggttttaccacaggccactggagaccagaaatct
ggtggaaaaggtgaaacagacagacgcatggttgcagccagaacagaacccctcactcca
aacccagcttctaagaaacagcgagtccacaaaagaggatccgaatctagttctgagtct
gactctgattctgagagatcatcctgttcttccagatcatcttcttcctcgtcttcctcc
tcctcttgttcccactctcgatcaggctctagttcttcttcatcctcctcttgttcttca
gcatcgtcctcatcctcatcctcatcctcttcctcatcatcctcctcttcatcttcatca
gaagacagtgacagtgaagaagacgaagtccaaaagcgagcagaaggtacccctcacgtg
aaagcctatgatgaagaaagtgttgcgtcactgagcactacccaggacgagacccaggat
agtttccagatgaacaatgggacaccagagtccgcttacatcttacaagggggatacatg
ctagcagcttcatattggccaaaggaccgcgtgatgatcaaccggctggacagtatatgt
caaacagtgctgaaagggaagtggccttcagctcgaagaagttacgatgccaacacagtg
gcttctttctataccacaaaactgctggacagtcctggcgcagctacagaatatagcgaa
cccagtgtacccactcccccaggtgccggtgttaaagaagaacacgatcagtcaacacag
atgtcaaaggtgaagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaa
ggtggtttgaagttgacatttcagaagcaagggcttgctcagaaaagaccgttggatagt
gaagacggtgccctggggcagcagcagtacctcgctcggcttcgggagctgcagagtgca
tcagagaccggcctcgccagtttccccaaatccatgccagtatcaggtacttccattcag
tcaacccttggtgccaatggagttagattggacaaccagcctatagtcaaaaaaaggcgg
ggaagaaggaagaatgtagaaggtgttgacatcctcttttttaacagaaataaaccacct
aaccatgttactttaggcttaaccacctcacaggtttctacagggataaatccagcactg
tcctatcctcaacctcaaggaattcctgatacggaaagtccagttccagttattaacctc
aaagatgggacaagacttgcaggcgatgatgcgccaaagagaaaggatttggaaaaatgg
cttaaggagcacccaggttatgtggaagatttaggagcttttattcctagaatgcagctc
catgaagggaggcccaaacaaaaaaggcatcgttgcagaaaccctaataagctcgatgtt
aatagtcttactggagaagaacgtgttcagctgattaacagaagaaatgccagaaaggtt
ggaggtgcatttgctccccctttgaaagatttgtgtagattcctaaaagaaaattcagaa
tatggagtagctcctgaatggggagatgttgttaagcagtctggatttcttccagaaagt
atgtatgagcgtattctcactggtcctgttgtgagagaggaggtcagcaggcgggggcgg
cggcctaaaagtggaatcgccaaggccacggcggcagcggcggcggcaactgccaccagc
gtgtcaggcaatcctttgttagccaacggattacttccaggtgtggatctcacaaccctt
caggccttacaacaaaacctacaaaacttgcagtctctgcaagtcaccgcagggctaatg
ggaatgcctgccggcctctcttctggaggagaagctaaaaacgtggccgccatgttcccc
atgctgctgtcgggaatgactggcttaccaaatctgctgggcatgggaggactcctgaca
aagcctaccgaatctggaaccgaagagaaaaagggaaatgactcgaaggagctagaagga
aaaaaagaaaggacagagagtcaaaattcagagaacgggggagaaaactccgtgtcgagt
tctccttccacgtcctctactgcggcattaagtacagctgccgccgccagcccgttagct
cttaacccactactgctgtctaatatactctatccagggatgctgctcactccaggcctt
aatctccacatgccgactttgtcccagtccaatacttttgacgtacagaaaaacaaaaac
agtgacttaggctcgtctaagtcgcaggaagtaaaggaggaagattccagagttagagat
caggaagacaaagggggaactgaagcaagtcctctcaacgagaacagcacagatgagggt
tcagaaaaagccgacgcttcgtctggatctgacagtacgtcgtcgtcgtccgaggattca
gattctagtaacgaagactga
DBGET
integrated database retrieval system
