Ailuropoda melanoleuca (giant panda): 100463901
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Entry
100463901 CDS
T01329
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04136
Autophagy - other
aml04140
Autophagy - animal
aml04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100463901 (ATG16L1)
04136 Autophagy - other
100463901 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100463901 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100463901 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
aml03029
]
100463901 (ATG16L1)
Membrane trafficking [BR:
aml04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100463901 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
100463901 (ATG16L1)
Mitochondrial biogenesis [BR:
aml03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100463901 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF12
CCDC93_CC
Beta-prop_NWD2_C
KASH_CCD
TolB_like
Phage_GPO
Fez1
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
100463901
NCBI-ProteinID:
XP_034511308
Ensembl:
ENSAMEG00000016324
UniProt:
G1MD49
LinkDB
All DBs
Position
2:192683679..192721204
Genome browser
AA seq
607 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDIPNRHEISPGHDGAWNDSQQQEMAQLRIKHQEELTELHKKRGELAHWVIELKNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDP
HPGSSKEVRVPTTAMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCELKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
TVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRV
VFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVVSVDKGSK
AVLWSEY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgccgacttcccccgctggaagcgccacatttcggaggag
ctgaggcggcgggatcggctgcagaggcaggcattcgaagagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaag
catgacatccccaacaggcatgagataagtcccggacacgatggtgcctggaatgatagt
caacaacaagaaatggcccagctgaggattaaacaccaagaagagctgactgaactacat
aagaagcgtggggagttagctcactgggtgattgagctgaaaaaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgcttgcagaccatctctgac
ctggagacagagtgccaagaactacgcagtaagctgcaggacctcgaaagagccaaccag
accctgaaggatgagtatgatgccctgcagatcacgtttactgccttggaggagaagctg
aggaaaactactgaagagaaccaggagttggtcacaaggtggatggccgagaaagcccag
gaagccaatcgcctaaatgcagagaatgaaaaagattcaaggaggcggcaggcccggctt
cagaaagagcttgcagaagcagcgaaggaacctctacctgttgaacaggacgatgacatt
gaagtcattgtggacgaaacctctgatcacactgaggagacgtctcccgtgcgagccatc
agcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggaggcgctctgtctcttcctttccagttccccaggataatgtggatcct
catcctggttctagtaaagaagtgagagtgccaacaacagcgatgtgtatcttcgatgct
catgatggggaagtcaacgctgtgcagttcagtccgggctcccggctgctggccacagga
ggcatggatcggagagttaagctttgggaagtgtttggagataaatgtgagctcaagggc
tccctgtccggcagtaatgcggggattacgagcatcgaatttgacagcgctggatcttac
ctcttagcagcttcgaatgattttgcaagtcgaatctggactgtggatgattatcggtta
cggcacacactcacaggacacagcggcaaagtgctgtctgccaagttcctgctggacaat
gcgcgtattgtttccggaagtcatgaccggaccctcaagctctgggatctacgcagcaaa
gtctgcataaagacggtgtttgcaggatccagctgcaatgatatcgtttgcacggagcag
tgtgtcatgagtggacatttcgacaagaaaattcgtttctgggacatccgatcggagagc
actgtccgggagatggagctgctggggaaaattactgccctggacttaaacccggagaga
acggaactcctcagctgctctcgtgatgacctgctaaagatcatcgacctacgaatcaat
gctgtcagacagacgtttagcgcgcctgggttcaagtgcggctctgattggaccagagtt
gtgttcagccctgatggtggttatgtggcagcgggctccgctgagggctctctctacatc
tggagcgtgctctcggggaaagtggagaaggtcctttccaagcagcatggctcgtccatc
aatgcggtggcgtggtccccctccggctcccacgtcgtcagtgtggacaaaggaagcaaa
gctgtgctgtggtcagagtattga
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integrated database retrieval system
