KEGG   Ailuropoda melanoleuca (giant panda): 100464155
Entry
100464155         CDS       T01329                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04820  Cytoskeleton in muscle cells
aml05169  Epstein-Barr virus infection
aml05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100464155 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100464155 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100464155 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100464155 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aml04812]
    100464155 (VIM)
   04147 Exosome [BR:aml04147]
    100464155 (VIM)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     100464155 (VIM)
Cytoskeleton proteins [BR:aml04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     100464155 (VIM)
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100464155 (VIM)
  Exosomal proteins of other cancer cells
   100464155 (VIM)
SSDB
Motif
Pfam: Filament Filament_head FKBP15 DUF1664 KIF21A_4th TolA_bind_tri DUF7491 TPR_MLP1_2 RBD-FIP Sec10_N GeBP-like_DBD DUF4515 CENP-F_leu_zip
Other DBs
NCBI-GeneID: 100464155
NCBI-ProteinID: XP_002918676
Ensembl: ENSAMEG00000010536
UniProt: G1LVM5
LinkDB
Position
15:15561895..15570162
AA seq 466 aa
MSTRSVSSSSYRRMFGGPGTGSRPSSTRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGA
YATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtccaccaggtctgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcaca
gggagccggccgagctccacacggagctacgtgaccacgtccacccgcacctacagcctg
ggcagcgcgttgcgccccagcaccagccgcagcctctatgcctcgtccccgggcggcgcg
tacgccacgcgctcctccgcggtgcgcctgcggagcagtgtgcccggcgtgcgcctgctg
caggactcggtggacttctcgctggccgatgctatcaacaccgagttcaagaacacccgc
accaacgagaaagtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggcggagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcggctccgggagaagttgcaggaggagatgcttcagagggaggaagccgag
agcaccctgcagtctttcagacaggatgttgacaacgcttccttggcacgtcttgacctt
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgag
gaaatccaggagctgcaggctcagattcaggaccagcatgtccaaatcgatatggatgtt
tccaagcctgacctcacggctgccctgcgtgacgttcgccagcagtacgagagcgtggct
gccaagaaccttcaggaggccgaggagtggtacaagtccaagtttgccgacctctctgag
gctgctaaccggaacaatgatgccctgcgccaggcaaagcaggagtcaaatgagtaccgg
agacaggtgcagtccctcacttgcgaagtggacgccctcaaagggactaacgagtctctg
gaacgccagatgcgtgaaatggaagagaactttgccgtcgaagctgctaactaccaagac
actattggccgcctgcaggacgagattcagaacatgaaggaggagatggcccgtcacctt
cgggaataccaggacctgctgaacgtcaagatggctcttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttct
ctgaacctgagggaaaccaatctggattcactccctctggttgacactcactcaaaaagg
acacttctgattaagacggttgagactagagacgggcaggttatcaatgaaacttctcag
catcacgatgaccttgagtaa

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