Ailuropoda melanoleuca (giant panda): 100464155
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Entry
100464155 CDS
T01329
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04820
Cytoskeleton in muscle cells
aml05169
Epstein-Barr virus infection
aml05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100464155 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100464155 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100464155 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100464155 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aml04812
]
100464155 (VIM)
04147 Exosome [BR:
aml04147
]
100464155 (VIM)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100464155 (VIM)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
100464155 (VIM)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100464155 (VIM)
Exosomal proteins of other cancer cells
100464155 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
FKBP15
DUF1664
KIF21A_4th
TolA_bind_tri
DUF7491
TPR_MLP1_2
RBD-FIP
Sec10_N
GeBP-like_DBD
DUF4515
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
100464155
NCBI-ProteinID:
XP_002918676
Ensembl:
ENSAMEG00000010536
UniProt:
G1LVM5
LinkDB
All DBs
Position
15:15561895..15570162
Genome browser
AA seq
466 aa
AA seq
DB search
MSTRSVSSSSYRRMFGGPGTGSRPSSTRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGA
YATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtctgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcaca
gggagccggccgagctccacacggagctacgtgaccacgtccacccgcacctacagcctg
ggcagcgcgttgcgccccagcaccagccgcagcctctatgcctcgtccccgggcggcgcg
tacgccacgcgctcctccgcggtgcgcctgcggagcagtgtgcccggcgtgcgcctgctg
caggactcggtggacttctcgctggccgatgctatcaacaccgagttcaagaacacccgc
accaacgagaaagtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggcggagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcggctccgggagaagttgcaggaggagatgcttcagagggaggaagccgag
agcaccctgcagtctttcagacaggatgttgacaacgcttccttggcacgtcttgacctt
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgag
gaaatccaggagctgcaggctcagattcaggaccagcatgtccaaatcgatatggatgtt
tccaagcctgacctcacggctgccctgcgtgacgttcgccagcagtacgagagcgtggct
gccaagaaccttcaggaggccgaggagtggtacaagtccaagtttgccgacctctctgag
gctgctaaccggaacaatgatgccctgcgccaggcaaagcaggagtcaaatgagtaccgg
agacaggtgcagtccctcacttgcgaagtggacgccctcaaagggactaacgagtctctg
gaacgccagatgcgtgaaatggaagagaactttgccgtcgaagctgctaactaccaagac
actattggccgcctgcaggacgagattcagaacatgaaggaggagatggcccgtcacctt
cgggaataccaggacctgctgaacgtcaagatggctcttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttct
ctgaacctgagggaaaccaatctggattcactccctctggttgacactcactcaaaaagg
acacttctgattaagacggttgagactagagacgggcaggttatcaatgaaacttctcag
catcacgatgaccttgagtaa
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