Ailuropoda melanoleuca (giant panda): 100464157
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Entry
100464157 CDS
T01329
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X2
KO
K12850
pre-mRNA-splicing factor 38B
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100464157 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100464157 (PRPF38B)
Spliceosome [BR:
aml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100464157 (PRPF38B)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100464157
NCBI-ProteinID:
XP_019655200
Ensembl:
ENSAMEG00000004364
UniProt:
A0A7N5P3D3
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All DBs
Position
2:75953252..75962006
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AA seq
549 aa
AA seq
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MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELERE
KERQRLEREAKEREKERRRSRSTDRGLERRRSSRSRERHRSRSRSRDRKGDRRDRDRERE
KENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKK
DSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQG
RTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEK
QHKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgcg
gccgcggctcagcagcagcagcagtgcggcggtggcggcggcggcgccaccaagccggcg
gtctcgggcaagcagggaaatgtgctgccgctgtggggcaacgagaagactatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgaaatctactttaaggtcacgcatgttgaaccg
tgggagaaaggaagcaggaaaacagcaggccaaacggggatgtgcggaggggttcgaggt
gttggaacaggaggaattgtttctacagctttctgcttgttatacaaattatttactcta
aagctaactcgtaagcaagtgatgggtctcataacacacacagactctccatatattaga
gcccttggatttatgtatataaggtacacacagccccctacagatctgtgggactggttt
gaatccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatg
accattggagaaatgctacggtcttttctcacaaaactggagtggttttctactctgttt
ccaagaattccggttccagttcagaagaatattgatcaacagattaaaacccggcctaga
aaaatcaagaaagatgggaaggaaggtgctgaggaaatagatagacatgttgaacgcagg
cgttcaaggtctccaaggagatcactgagtccacggaggtccccaagaagatcaagaagt
agaagccatcatcgggagggccatgggtcttctagtttcgatcgagaattagaaagagag
aaagaacgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcgaagatcc
cgaagtactgatcgaggtttggaacgcaggcggagtagcaggagtagggaaaggcataga
agccgtagtcgaagtcgggataggaaaggggatagaagggacagggatcgggaaagagag
aaagaaaatgagagaggtagaagacgagatcgtgactatgataaggaaagagggaatgac
cgagaaaaggagcgggagcggtcaagagaacggtccaaggaacggagaagtaggggtgag
gtagaagagaagaagcacaaagaagataaagatgacaggcggcatagagatgacaaaaaa
gattccaagaaggagaaaaaacacagtaggagtagaagcagagaaagaaaacacagaagt
aggagtagaagtagaaatgcagggaaacgaagcagaagcaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagaaaaatcaaataaacgaagtagaagtggcagtcaagga
agaactgacagtgttgaaaaatcaagaaaacgggaacatagccccagcaaagaaaaatct
agaaagcgtagtagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggac
cagtctgacaaacatgatcgtcgaaggagccaaagtatagaaccagagagccaagaaaaa
caacataaaaacaaagatgagactgtgtga
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