Ailuropoda melanoleuca (giant panda): 100464762
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Entry
100464762 CDS
T01329
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100464762 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100464762 (CPSF2)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100464762 (CPSF2)
U7-dependent histone pre-mRNA processing factors
100464762 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
100464762
NCBI-ProteinID:
XP_034498271
Ensembl:
ENSAMEG00000014835
UniProt:
G1M8E6
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All DBs
Position
14:30406592..30439532
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AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctctctggggttcaagaagagtctgctctttgc
tatcttctgcaagttgatgagtttcgatttctgttggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcacgttcaccaaattgatgcggtactgttg
tcccaccccgatccccttcatctcggtgcccttccatacgccgtcgggaagttgggtctg
aactgtgctatctacgcgaccattcctgtttataaaatggggcagatgttcatgtatgat
ctttaccagtctcgacacaatacagaagactttacactctttacgttagatgatgtggat
gcagcctttgataaaatacaacagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctgcccgctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttacgcagttgactttaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcagaccctccctgcttatcaca
gattcctttaatgctacgtatgtgcagcctaggagaaaacagagagacgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtattaatagcagtggacactgca
ggcagagttttggaacttgctcaactccttgatcaaatctggagaactaaagatgcagga
ctgggcgtctactcactggcactcctcaataatgtcagctataatgtggtggagttttcc
aagtcccaggtagaatggatgagtgacaaattgatgagatgttttgaagacaaaagaaat
aatccatttcagtttcgccatctctctttatgtcatggtctttctgacttggctcgggta
cctagccccaaagtggtactcgccagccagcccgacctggaatgtggattttcaagggat
ctcttcattcagtggtgtcaggaccctaaaaactcaatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacagaaatagag
ttgaggaaacgtgtgaagcttgaagggaaagaactagaagaatacttggaaaaagagaaa
ctaaagaaagaagcggcaaaaaaacttgagcagtcaaaagaggcagacatagattccagt
gatgagagtgatgttgaggaagacattgaccagccgtcggctcataagactaagcatgat
ctgatgatgaagggtgaaggtagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
taccctatgtttcctgccccggaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagcgactgaagaagagaaaagcaaatta
gaatctggcttgacaaatggagatgaacccatggatcaggatttatctgatgttcctacc
aagtgtatttctacaacagagtctattgaaataaaagccagggttacttacatagactat
gaaggacgctccgatggagattccattaaaaagatcattaatcagatgaaaccacgacag
ttgatcattgtccacggaccaccagaggccagtcaggatctcgcagagtgctgccgtgcg
ttcggtgggaaagatattaaagtgtacatgccaaagcttcacgaaacagttgatgccact
agtgaaactcacatctaccaggtgagattgaaagattcgcttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaattagcttggatagatggtgtcttggacatgagagtttcc
aaagtggacacaggagttattttagaagaaggtgaactgaaggatgatggagaagactca
gaaatgcaggtggacgctccttcggattccagcgttatagcacaacagaaggccatgaag
agtctgttcggggatgatgagaaagagacaggtgaagaaagcgagatcattccgaccttg
gaacccttacccccccacgaggttcctggacatcagtcagtttttatgaacgaaccaaga
ctgtcagacttcaagcaagttcttttacgggaggggattcaagctgaatttgtaggaggt
gtacttgtttgcaacaaccaagtagcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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