Ailuropoda melanoleuca (giant panda): 100464817
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Entry
100464817 CDS
T01329
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04022
cGMP-PKG signaling pathway
aml04024
cAMP signaling pathway
aml04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100464817 (CNGA1)
04022 cGMP-PKG signaling pathway
100464817 (CNGA1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
100464817 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100464817 (CNGA1)
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100464817 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
EMC3_TMCO1
Ion_trans_2
Tim54
Serinc
RNA_polI_A34
Zip
SLC52_ribofla_tr
Sec62
NPR3
MCM_bind
RR_TM4-6
Presenilin
DUF2828
Motif
Other DBs
NCBI-GeneID:
100464817
NCBI-ProteinID:
XP_011220336
Ensembl:
ENSAMEG00000003224
LinkDB
All DBs
Position
11:71727968..71742047
Genome browser
AA seq
692 aa
AA seq
DB search
MKKNIINTWYSFVNVPNVIAPDIDKEIRRMENGAGSSFSDDDDDDDSTSMFEESESENLH
ARDSCRNNSHRGGPSQREQYLPGALALFNVNNSSNKEQEPKEKKKKKKEKKSKPDDKNEN
KKDSEKKKKKEKEKEKKKKEEKGKDKKEEEKKEVMVIDPSGNIYYNWLFCITLPVMYNWT
MVIARACFDELQSDYLEYWLIFDYLSDIIYLLDMFVRIRTGYLEQGLLVKEETKLIEKYK
SNFQFKLDFLSVIPTDLLYFKLGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRIS
NLVMYIVIIIHWNACVYFSISKAVGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLT
TIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYM
HFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFA
DCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDG
SYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGKQ
ILMKDGLLDINIANAGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTK
VERFLKPLIDTEFSALEGSEGVESGLLDSTQD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatattatcaatacatggtactcttttgtaaacgttcccaatgtgattgct
ccagatattgataaggaaataagaaggatggaaaacggagcagggagctccttttctgat
gatgatgatgatgatgacagtacctccatgtttgaagaatcagagagtgaaaacctgcat
gcaagggattcctgcagaaataactcacacagaggggggccatcacagagggagcagtac
ctgcctggtgcccttgcgcttttcaatgttaacaacagcagcaataaggagcaagaacca
aaggaaaaaaagaaaaagaaaaaagaaaagaagagcaaaccagatgataaaaatgaaaat
aaaaaggactcagagaagaaaaagaagaaagaaaaagaaaaagagaagaaaaagaaagag
gagaaaggcaaagataagaaagaagaggagaagaaagaagtcatggttattgatccctcg
ggaaacatatattacaactggctcttttgcatcactttacctgtaatgtacaactggact
atggttattgcaagagcatgttttgatgaacttcagtctgattacctagaatattggctc
atttttgactacctatcagatataatctatcttcttgatatgtttgtacgaataaggaca
ggttatttagaacaaggactgctggtgaaggaggagactaaactcatagagaaatataaa
tcaaactttcaatttaaacttgattttctatcagtgattcccactgatctgctgtatttt
aagctggggtggaactatccagaaattagattaaacagactgttaaggatctctcgaatg
tttgagttcttccagagaacagaaacaagaacaaactacccaaacatctttaggatttct
aaccttgttatgtacattgtcatcattatccactggaatgcatgtgtgtacttctctatt
tccaaagctgttggatttggaaatgatacatgggtgtatcctgatgttaatgatcccgaa
tttggccgtttggctagaaaatacgtatacagcctttactggtctaccctgactttgacc
acaattggtgaaacaccgcctcctgtgagggattctgagtatgtctttgtggtggttgat
ttcttaattggagtgttaatttttgctaccattgttggtaacataggttctatgatttcc
aacatgaatgctgccagagcagaatttcaagcaagaatcgacgcgatcaagcaatatatg
cattttcgaaatgtaagcaaagatatggaaaagagggttatcaaatggttcgactatctg
tggaccaacaaaaaaactgttgatgagaaagaagtcctgaagtatctccctgataagctg
agagcagagattgccatcaacgtacacttagacactttaaaaaaggtgcgtatttttgcg
gactgtgaagctggtctgttggtggagttggtcttgaaattgcagccccaagtctacagt
cctggagattacatttgcaagaagggggatattggacgagagatgtacatcatcaaggaa
ggcaagctcgctgtggtggcagatgatggaatcactcagtttgtggtattgagtgacggc
agctactttggtgagatcagtatccttaacattaaaggcagcaaagctggcaatcgaaga
acagccaatattaaaagtattggctactcagatctgttctgtctctcaaaagatgacctc
atggaagctctaactgagtacccagatgccaaaactatgctagaagagaagggaaagcaa
atcttgatgaaagatggtctactggatataaatattgcaaatgctggaagtgatcctaaa
gatctcgaagagaaggtcacccgaatggaggggtcagtagacctcttgcaaacgaggttt
gctcggatcttggctgagtatgagtcaatgcagcagaaactgaagcaaagactaaccaaa
gttgagagatttctgaaaccgctaattgacacagaattttcagctcttgaaggatctgaa
ggagttgaaagtgggctcctggactccacacaggactga
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