Ailuropoda melanoleuca (giant panda): 100464834
Help
Entry
100464834 CDS
T01329
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X3
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03082
ATP-dependent chromatin remodeling
aml04714
Thermogenesis
aml05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100464834 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100464834 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100464834 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100464834 (SMARCA4)
03036 Chromosome and associated proteins [BR:
aml03036
]
100464834 (SMARCA4)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100464834 (SMARCA4)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100464834 (SMARCA4)
Chromatin remodeling factors
BAF complex
100464834 (SMARCA4)
PBAF complex
100464834 (SMARCA4)
GBAF(ncBAF) complex
100464834 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
100464834
NCBI-ProteinID:
XP_002921403
Ensembl:
ENSAMEG00000010868
UniProt:
A0A7N5J8X8
LinkDB
All DBs
Position
4:7927667..8015314
Genome browser
AA seq
1647 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGAHAGMGPPPSPMDQHSQGY
PSPLGSSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGIPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEDEEEEEEQPQPAQPPNLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
RAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggtggaactcctcggccaggcccttcgccgggcccg
ggcccctcccctggagccatgctgggccctagcccgggtccctcaccgggctctgcccac
agcatgatggggcccagcccagggcctccctcagcaggtcaccccatcccgacccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcggatgacccccgctacaaccagatgaagggaatggggatgcggtcg
ggggcccatgcagggatggggcccccgccaagccccatggaccagcactcccaaggttac
ccttcccccctgggcagctccgagcatgcctccagtccggttccagccagtggcccgtcg
tcaggcccacagatgtcctctgggccaggaggggcccccctggatggtgccgatccccaa
gctttggggcagcagaaccggggcccgactccatttaaccagaaccagctgcatcagctc
agagcccagatcatggcatacaagatgctggccaggggacagcccctccccgaccacctg
cagatggcggtgcaggggaagcggcctatgcccgggatgcagcagcagatgccaacacta
cctccaccctctgtgtccgccacgggacctggccccggccctggccctggcccgggtccg
ggtccaggaccagcacctccaaattatagcaggcctcacggtatgggagggcccaatatg
ccccccccaggaccctcaggcgtgccccctgggattcccggtcagcctcccggagggcct
cccaagccttggcctgaaggacccatggcaaatgctgctgcccccacgagcacacctcag
aagctgatccccccacagccaacgggccgcccctcacctgcaccccctgccgtcccgccc
gctgcctccccggtgatgccgccccagacgcagtcgccagggcagcctgcccagcctgcc
cccatggtgccattgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctggaccctgtggagatcctgcaggagcgcgagtacaggctgcaggctcgaatcgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaggcgctcaggctgctgaacttccagaggcagctacgacaggaagtg
gtggtgtgcatgaggagggacacagccctcgagacggccctcaacgccaaggcctacaag
cgcagcaagcggcagtccctgcgtgaggcccgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaacagcattctg
cagcatgccaaggatttcaaagaatatcacagatcggtcacaggcaaaatccagaagctc
acgaaggcggtggccacgtaccacgccaacacggagagggaacagaagaaggaaaacgaa
agaattgagaaagaaagaatgcggagactcatggctgaagatgaggaggggtaccgtaag
ctcatcgaccagaagaaggacaagcgcctggcctacctcttgcagcagacagatgagtac
gtggctaacctcacggagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacacctgcaatcgga
cctgatggcgagcctctggatgagaccagccaaatgagcgacctgccagtgaaagtgatc
cacgtggagagcgggaagatcctcacgggcaccgatgcccccaaagcagggcagctagag
gcctggcttgagatgaacccgggatatgaagtagctccaagatctgatagtgaagaaagt
ggctcagaagaagaggacgaggaggaggaggaggagcagccacagccagcacagcctccc
aacctgcccgttgaggaaaagaagaagattccagatccagacagcgatgatgtctcagag
gtggatgcccggcacatcattgagaacgccaagcaagacgtggatgacgagtacggcgtg
tcccaggcccttgctcggggcctgcaatcctattacgccgtggcccatgctgtcactgag
agagtggataagcagtcggcgcttatggtgaatggtgtcctcaaacagtaccagatcaaa
ggcttggagtggctggtgtccctgtacaacaacaacctgaatggcatcctggctgatgag
atgggcctggggaaaaccatccagaccatcgctctcatcacgtacctcatggagcacaag
cggatcaacggaccctttctcatcatagtacctctctccacgctgtcaaactgggcatat
gaatttgacaagtgggccccctctgtggtgaaggtgtcctacaagggttctccagcagcc
agacgtgctttcgtcccccagctccgaagtggcaagttcaacgtcttgctgacgacttac
gagtacatcattaaggataagcacatccttgcgaagatccgttggaagtacatgattgtt
gatgaaggccaccgaatgaagaaccaccattgcaaactgacacaggtcctcaacactcac
tacgtggcccctcgccgcctgctgctgacgggcacgccgctgcagaacaagctccccgag
ctctgggcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcgcccttcgccatgaccggagaaaaggtggacctgaacgaggaggag
acgattctcatcatccgtcgtctccacaaagtgctgcggccctttctgctccggcggctc
aagaaggaagtcgaagcccagttgcctgagaaggtggaatacgtcatcaagtgtgacatg
tctgcactacagcgagtgctctacaggcacatgcaggccaagggggtgctgctcaccgac
ggctccgagaaggacaagaagggcaaaggtggtaccaagaccctgatgaacacaatcatg
cagctgaggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttctcc
gagcacttgggttttaccggtggcatcgtgcaagggctggacctgtaccgagcctcgggg
aagtttgagcttctcgataggattcttcccaaactccgtgccaccaaccacaaagtgctg
ctcttctgtcagatgacctccctcatgacgatcatggaagattattttgcgtatcgtggc
tttaaatacctcaggctcgatggaacgacgaaagcggaggaccggggcatgctgctgaaa
accttcaacgagcccggctccgagtacttcatcttcctgctcagcacccgcgccggaggg
ctcgggctaaacctccagtcggctgacactgtgatcatcttcgacagtgactggaacccc
caccaggacctgcaagcccaggaccgcgcccaccgcatcgggcagcagaacgaggtgcgg
gtgctccgtctctgcacggtcaacagcgtagaggagaagattctggccgcggccaaatac
aagctcaatgttgaccagaaggtgatccaggctggcatgtttgaccagaagtcctccagc
cacgagaggcgtgccttcctgcaggccatcctcgagcacgaggaacaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagatgaagtgcccgacgacgag
acggtgaaccagatgattgcccggcacgaggaggaatttgacctgttcatgcgcatggac
ctggaccgcaggcgcgaggaggcccgaaaccccaagcggaaaccgcgcctgatggaggag
gacgagctcccgtcgtggatcatcaaggacgatgcagaggtggagcgactgacctgtgaa
gaggaagaggagaagatgttcggccgcggctcccgccatcgcaaggaggtggactacagc
gactcgctgaccgagaagcagtggctcaaggccatcgaggagggcacgctggaggagatc
gaagaggaggtccggcagaagaaatcgtctcggaagcgcaagcgggacagtgacgccggc
tcctccaccccgaccaccagcacccgcagccgcgacaaggacgacgagagcaagaagcag
aagaagcgtgggcggccacccgccgagaagctctccccaaaccctcccaacctcaccaag
aagatgaagaagatcgtggacgctgtgatcaagtacaaggacagtagtagtggacgtcag
ctcagcgaggtgttcatccagctgccctcccgcaaggagctgcccgagtactacgagctc
atccgcaagcctgtggacttcaagaagataaaggagcgcatccgcaaccacaagtaccgc
agcctcaatgacctggagaaggacgtcatgctgctgtgccagaacgctcagaccttcaac
ctggagggctccctgatctacgaagactccattgttctgcagtcggttttcaccagcgtg
cggcagaaaatagagaaagaagatgacagtgagggcgaggagagcgaggaagaggaggag
ggcgaggaggaaggctctgagtctgagtcccgctcagtcaaagtgaagatcaagctgggc
cggaaggagaaggcacaggatcgactgaaggggggccggcggcggccgagccgcggctcg
cgggccaagccagtggtgagcgatgacgacagtgaagaggagcaggaggaggaccgctca
ggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
