Ailuropoda melanoleuca (giant panda): 100464972
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Entry
100464972 CDS
T01329
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04140
Autophagy - animal
aml04148
Efferocytosis
aml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100464972 (VPS41)
04148 Efferocytosis
100464972 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100464972 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100464972 (VPS41)
Membrane trafficking [BR:
aml04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
100464972 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
zf_RING_Vps8_fungal
Vps39_1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
zf_RING_Vps8
zf-RING_5
TPR_PEP5_VPS11
Beta-prop_RIG_2nd
zf-C3H2C3
RIG-I_C
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100464972
NCBI-ProteinID:
XP_002914186
Ensembl:
ENSAMEG00000008248
UniProt:
G1LNV5
LinkDB
All DBs
Position
1:122428725..122601619
Genome browser
AA seq
854 aa
AA seq
DB search
MAEAEEQETESLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGMCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWK
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGEPLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVEKGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLADLYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKRMHRTQM
KGVLVDEENICESCLSPVLPADAAKPFSVVVFHCRHMFHKECLPVPSMSSPAQFCGICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaaaccgagtctctggaagaatctacagatgagtctgag
gaagaagaaagtgaagaggagcccaaactgaagtatgaaaggctttccaatggggtaact
gaaatccttcagaaggacgcagctagctgcatgacagtccatgacaagtttttggcactg
ggcacgcattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcagattagcctggacgagagtggagagcacatgggc
atgtgttcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagactttcgactgtcccattaaaatcattgccgtgcacccgcatttcgtgagatccagc
tgcaagcagtttgtgactggagggaagaagttgctgctattcgaacgatcttggatgagc
agatggaagtcttctgtcctgcacgaaggggaagggaacatacggagcgtgaagtggaaa
ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacataacctccaag
cagagaatcaccaacgtgccccgggatgacataagtcttcgcccagatatgtatccatgc
agcctctgctggaaggacaatgtgacgctgattattggctgggggacttctgtcaagatc
tgctcagtgaaggagcggcacgccagtgaaatgagggatttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacatcagtgggcttgcacctctctgcgatcag
cttgtggttctttcctatgtgaaggaggtgtcggaaaaaacggaaagagaatactgtgcc
aggccaagactggatattatccagccactctctgaaacctgtgaagagatctcttccgac
gctctgacagtgagaggctttcaggagaacgagtgtagagattatcatttagagtactct
gaaggggaaccgctcttctacatcgtgagtccaagagacgtggtagtagccaaggaacga
gaccaagacgaccacatcgactggctcctcgaaaagaagaaatacgaggaagctttgatg
gcagctgaaatcagccagaagaacattaaaagacataagattctagatatcggcttggca
tatataaaccacctggtggagaaaggagagtatgacatagcagcacgaaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtttataaatttaaagaaattgga
cagcttaaggctattagtccttacttgccaagaggagatccagttctgaaaccactcatc
tatgaaatgatcttacatgaatttttggaaagtgattacgagggttttgccactctgatc
cgagaatggcctggagatctgtacaacaattcagtcatcgttcaagcagttcgggaccac
ctgaagaaggatagtcagaataggaccttgctcaaaaccctggcagacttgtacacctat
gacaaaaactatggcaatgctctggagatatacttaacattaagacacaaggacgttttc
cagttgatccacaagcataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgtcgacatgcttttggacaacgaagacaaaatttcaatt
aaaaaggtagtggaagaactggaagacagaccagagttgcagcacgtgtatctgcataag
cttttcaagagagaccatcataaggggcagcgctaccatgaaaaacagatcagtctttat
gctgaatatgatcgaccaaacttacttccctttctccgagatagtacccattgcccactc
gaaaaggctcttgagatctgtcaacagagaaacttcgtagaagagacagtctatcttctg
agccgaatggggaatagccgaagtgccctgaagatgatcatggaggaattacatgatgtt
gataaagcaattgaatttgccaaggagcaagacgatggagaactctgggaagatctgatt
ttatattccatcgacaaaccaccatttatcactggcttgttaaacaacattggcacgcat
gtggacccaattctcttgattcaccgtattaaggaagggatggagatccccaatttgaga
gactccttggttaaaattctgcaagactacaatttgcaaattctgcttcgtgaaggctgc
aagaagattctcgtagcggactctttgtccttactgaagagaatgcaccgaactcaaatg
aaaggcgttctggtcgatgaggagaacatttgtgaatcgtgcctttcccctgttcttcca
gcagatgccgctaagcccttcagcgtagtggtcttccactgccgccacatgttccacaag
gagtgcctgcccgtgcccagcatgagctcccccgcgcagttctgcggcatctgcagcgcc
aagcaccgcggcccggggagcgccatcctggagatgaagaagtag
DBGET
integrated database retrieval system
