Ailuropoda melanoleuca (giant panda): 100465094
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Entry
100465094 CDS
T01329
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04120
Ubiquitin mediated proteolysis
aml04137
Mitophagy - animal
aml04144
Endocytosis
aml04340
Hedgehog signaling pathway
aml04350
TGF-beta signaling pathway
aml04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100465094 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100465094 (SMURF1)
04350 TGF-beta signaling pathway
100465094 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100465094 (SMURF1)
04137 Mitophagy - animal
100465094 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
100465094 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100465094 (SMURF1)
04121 Ubiquitin system [BR:
aml04121
]
100465094 (SMURF1)
03029 Mitochondrial biogenesis [BR:
aml03029
]
100465094 (SMURF1)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100465094 (SMURF1)
Membrane trafficking [BR:
aml04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100465094 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
100465094 (SMURF1)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
HECT type E3
100465094 (SMURF1)
Mitochondrial biogenesis [BR:
aml03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100465094 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
100465094
NCBI-ProteinID:
XP_019660377
Ensembl:
ENSAMEG00000006728
LinkDB
All DBs
Position
10:complement(5606039..5674450)
Genome browser
AA seq
756 aa
AA seq
DB search
MRSIRTMGYHSVRKRNEVPIHATTWVNFKNTLSGRSQSQNATYVLCAKNLAKKDFFRLPD
PFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFL
GCARLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGL
LENEGTVYEDSGPGRPLSCFMEEPAPYTDSTGAAAGGGDCRFVESPSQDQRLQAQRLRNP
EVRGSLQTPQNRPHGHQSPELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVN
CDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPSE
GSVEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRP
KDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSI
NPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVW
ILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIE
AQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDVSDWKSNTRLKHCVADSNIVRW
FWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPK
AHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctatccgtacaatggggtatcactcagttaggaaaaggaatgaggtaccgatt
cacgctacaacgtgggtgaactttaaaaacacgctcagtggaagaagccagtcacaaaat
gccacatacgtattatgtgccaagaaccttgcaaagaaagacttcttcagactccccgac
ccctttgcaaagattgtggtggacggatctgggcagtgccactcaacggacactgtgaaa
aacacattggaccccaaatggaaccagcactatgatctgtatgttgggaagacggattcg
ataaccatcagcgtgtggaaccacaagaagattcacaagaagcaaggagctggcttcctg
ggctgtgcgcggctgctgtccaacgccatcagcagactgaaggacactggctaccagcgt
ttggatctatgcaaactaaatccctcagatactgatgcagttcgtggccaaatagtggtc
agtttacagacacgagacaggataggcactggcggctctgtggtagactgcagaggactg
ttagagaatgaaggaaccgtgtatgaagactcggggcctggaaggccactcagctgcttc
atggaggagccggccccttacacggacagtaccggtgctgctgcggggggaggggactgc
aggttcgtggagtccccgagtcaagatcaaagactccaggcgcagcgactccgaaatcct
gaggtccgggggtccctccagacgcctcagaaccgaccccacggccaccagtcaccagaa
ctgcccgaaggctacgaacaaagaacgacggtgcagggccaagtttactttttgcacaca
cagactggagttagcacatggcacgaccccaggataccaagagaccttaacagtgtgaat
tgcgatgaacttggaccactgccaccaggttgggaagtcagaagtacagtttcggggaga
atatattttgtagaccataataaccgaaccacccagtttacagacccaagattacatcac
atcatgaatcaccagtgccaactaaaggagcccagccagccgctgccattgcccagcgag
ggctctgtggaagatgaggagcttcctgcccagagatatgaaagagatttagtccagaag
ctgaaggtcctcagacatgaactttcactccagcagccccaagctggtcattgccgcatc
gaagtatccagagaagaaatattcgaggagtcttaccgccagatcatgaagatgcggccg
aaggatctgaagaagcggctgatggtgaagttccggggagaagaaggcttggattatggc
ggcgtggcgagggagtggctttatttattgtgccatgaaatgttgaatccgtattatgga
ctcttccaatattctacggacaacatttacatgttgcagattaatccagattcttcgatc
aaccctgaccatttgtcttatttccattttgtgggccggatcatgggtctcgccgtgttc
cacggacactacataaatgggggcttcacagttcccttctataagcagctactggggaaa
cccatccagctctcggatttggagtcggtggacccagaattacataagagcttagtgtgg
attctagagaacgatatcacccctgtgctggaccacactttctgtgtggaacacaatgct
ttcgggaggattcttcagcatgaactgaaacccaatggccgaaacgttcctgtcacagag
gagaacaagaaagaatatgtccggttgtatgtaaattggaggttcatgagggggatcgaa
gcccagttcttagcgcttcagaaggggtttaatgaactcatccctcaacacttactgaag
ccttttgaccagaaggaactagagctgatcatcggcggcctggataaaatcgacgtgagc
gactggaagtccaacactcggctgaaacactgcgtggccgacagcaacatcgtgcggtgg
ttctggcaggccgtggagaccttcgacgaggagaggagggccaggctcctgcagttcgtc
accggctccactcgggtccctctccaaggcttcaaggctttgcaaggttctacaggcgcg
gcagggccccggctcttcaccatccacctgatcgacgccaacacagacaaccttccgaag
gcccacacctgctttaatcggattgacattccaccttacgagtcatatgagaagctctat
gagaagctgctgacagccgtggaggagacctgtgggtttgctgtggagtga
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integrated database retrieval system
