Ailuropoda melanoleuca (giant panda): 100465141
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Entry
100465141 CDS
T01329
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03022
Basal transcription factors
aml03420
Nucleotide excision repair
aml05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100465141
09124 Replication and repair
03420 Nucleotide excision repair
100465141
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100465141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100465141
03400 DNA repair and recombination proteins [BR:
aml03400
]
100465141
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100465141
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100465141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
IBR
Motif
Other DBs
NCBI-GeneID:
100465141
NCBI-ProteinID:
XP_002915938
Ensembl:
ENSAMEG00000003288
UniProt:
G1L9B0
LinkDB
All DBs
Position
3:47496447..47518537
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQVGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEHNGEKFCYGCQGELKDQHVYVC
AVCQTVFCVDCDVFVHDSLHCCPGCIHKIPTSSSI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaaggacatgggag
attcttaaagaagatgaatcaggatcacttaaagctacgatagaagacattctcttcaaa
gcaaagagaaaaagagtatttgagcaccatggacaagttcgacttggaatgatgcgtcat
ctttatgtggtagtagatggctcaagaacgatggaagaccaagatttaaagccaaataga
ctgacttgtactttaaagctgttggaatacttcgtagaagaatattttgatcaaaatcct
attagtcaggttggaataattgtaacaaagagtaaaagagctgaaaaactgaccgaactc
tcaggaaacccaaggaaacatataacatctttgaagaaagctgtagatatgacctgccat
ggagaaccatctctctataactccttaagcatggctatgcaaactctaaagcacatgcct
gggcatacaagtagagaagtcctaatcatctttagcagcctcacaacttgtgatccatct
aatatctatgatctaatcaagaccctgaaggcagctaaaattagagtgtccgttattgga
ttgtctgcagaggttcgggtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagaattgctgacacatcatgttagtcctccgcct
gccagctcaagttctgaatgttcacttattcgcatgggatttcctcagcataccattgct
tctctgtctgatcaagatgcaaaaccctctttcagcatggcgcacttggacagcaacact
gagccaggactcacgttaggagggtatttctgcccacagtgtcgggcaaagtactgtgag
cttccagtcgaatgtaaaatctgtggtcttactttggtgtctgctccgcatttggcacgg
tcttaccatcatttatttcctttggatgcttttcaagaaattccactagaagaacataat
ggagaaaaattttgttatggatgtcagggggaattgaaagaccaacatgtctatgtttgt
gctgtgtgccaaactgttttctgcgtggactgtgatgtttttgttcacgactctcttcac
tgttgtcctggctgtattcataagattccaacttcttctagtatttga
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