Ailuropoda melanoleuca (giant panda): 100465401
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Entry
100465401 CDS
T01329
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100465401 (CTCF)
03036 Chromosome and associated proteins [BR:
aml03036
]
100465401 (CTCF)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100465401 (CTCF)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100465401 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
100465401
NCBI-ProteinID:
XP_034494122
Ensembl:
ENSAMEG00000017438
UniProt:
G1MGF9
LinkDB
All DBs
Position
12:63546462..63593527
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gaaagaaagacttaccagagacgccgggaagggggccaggaagaggatacttgtcacctg
ccccagaaccagactgatgggggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtaatgatggaacagctggatcccacccttcttcagatgaagactgaagtaatggagggt
acagtcgctccagaagcagaggctgctgtggacgatacccagatcataaccttgcaggtt
gtaaatatggaggaacaacccataaacataggagagcttcagcttgtccaagtacccgtt
cccgtgactgtacctgttgccaccacttcagtagaagaacttcagggggcttatgaaaat
gaagtgtctaaagagggccttgcagaaagcgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtgaaagtgggggccaatggagaggtggagacgctagagcaa
ggggaactaccgcctcaagaagatcctagttggcaaaaagacccagattatcagccgcca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctatgattttgaggaagagcagcaggagggtctgctatcggaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacatgtccacggcgttcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggcattcagaacagtcaccctcctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgactagtggagaattggtgcggcat
cgtcgttataaacacacccatgagaagccatttaagtgttccatgtgcgattacgccagt
gttgaagtcagcaaattaaaacgtcatattcgctctcatactggagagcgtccgttccag
tgcagcttgtgcagttacgccagcagggacacatacaagctgaaaaggcacatgagaact
cattcaggggaaaaaccttatgaatgttacatttgtcatgctcggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctacattgagcaaggcaagaaatgtcgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcatcagaagtcgcacaagaacgagaagcgctttaagtgtgaccagtgt
gattatgcttgcagacaggagaggcacatgatcatgcacaagcgcacccacaccggggag
aagccttacgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctaccatgaccccaactttgtccctgcagcctttgtctgttctaagtgt
gggaaaacctttacacgccggaataccatggcaagacatgctgacaattgtgctggtcca
gatggcgtagaaggggagaacggaggggaaacaaagaagagtaaacgtggcagaaaaaga
aagatgcgttccaaaaaagaagactcctccgacagtgaaaatgctgagccagacctggat
gacaatgaggatgaggaggaacctgctgtggaaattgaacccgagccagagcctcagcct
gtgaccccagccccaccacctgccaagaagcggagaggacgccctcctggcagaaccaac
cagcccaaacagacccagccaacagccatcatccaggtggaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgcggagcccgtggagggggag
gaagaggaggcccaaccagctgccacagacgcccccaacggagacctcacgcccgagatg
atcctcagcatgatggaccggtga
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integrated database retrieval system
