Ailuropoda melanoleuca (giant panda): 100465462
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Entry
100465462 CDS
T01329
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100465462 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100465462 (PEX1)
Membrane trafficking [BR:
aml04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100465462 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
RuvB_N
nSTAND3
TIP49
AAA_33
AAA_5
AAA_22
AAA_28
ABC_tran
AAA_7
RNA_helicase
DUF815
IstB_IS21
Sigma54_activat
Mg_chelatase
AAA_19
AAA_29
Parvo_NS1
AAA_2
Vps4_C
AAA_10
Motif
Other DBs
NCBI-GeneID:
100465462
NCBI-ProteinID:
XP_002930906
Ensembl:
ENSAMEG00000002049
LinkDB
All DBs
Position
1:complement(142522961..142565749)
Genome browser
AA seq
1268 aa
AA seq
DB search
MWGSDRLAGAEGSGVAVTVVFTNARDCFLHLPRRLVAQLHLLQNQAIEVAWGHQPAFLSW
VEGRHFSDQGENVAEINRQVGQKLGLSNGDQVFLKLCSHVVSCQQVEVEPLSADDWEILE
LHAASLEQHLLDQIRIVFPRAIFPVWVDQQTYIFIQIVALMPAAAYGRLEIDTKLLIQPK
TRQAKENTFAKADNAQGKFRNYGGDQKGLTVTGSNKTDSEVTADSPSVPSLWTMIGSIFS
FGSEKKPELSWGLTEMNAFKTMQSKVVPLDNIFRVCKSQPPSVCDATAASEFHKHCAVHV
FPWDQEYFGMEPSFTVTYGKLIKLLSPKQQQSKTKQNVLSLENEKQPLEPLDQKPITSDR
GQEAAKACVLPVVWNGLEELKNAIKYTKTVEALHLGKVWIPDDLRKRLNIEMHAVVRITP
VEITPKIPRSLKLQPRENLPNDVSGEDVRAVFSSWLQQCTTTTLPLIISEEEYIKLRIKD
GLKEFSLSVVHSWEKEKENIFLLSASLLQKTTIQVLLDPMVKEENSEDIDFILPFLKLNC
LGGVNSLGVSSMEHITHSLLGRPLSRQLMSLVAGLRNGALLFTGGKGTGKSTLAKAVCKE
ASDIFDAHVEIVDCKALRGKRLENIQKTLELAFSEAAWRQPSVILLDDLDLVAGLPAVPE
HERSPEAAQSQRLAHALSDMMKEFISMGSLVALTATSQSQHSLQPSLVSAQGTHIFQCVQ
HIHPPDQEQRCEILHNVIKNKLDCEISRFTNLDLKRIAKETEGFVARDFTVLVDRAIHSH
LSHQSISTREELALTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDT
IQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISIKGPELLSKYI
GASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQ
GVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHV
ASVTDSFTGADLKALLYNAQLAALHGRLLFSGLQDGSSSSDSDLSLSSMVFLNHSSGSDD
SAGDGECGLEQSLVSLELSEMLPDESKFNMYRLYFGSSYESELGNGTSSDLSSQGLSAPS
SMTQEFSGVPGREQSFSRPPVLRTASQEGYPELTQEQREQLRAEISVIRGRYRSQSGEDD
SLHQPGPVKNSLAISQSHLMAALSHTRPSISEEDWKNFAELYENFQNPKKRKNQSGTMFR
PGQKVTLA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcgatcgcttggcgggtgcagagggtagtggggtagcggtgacggtggtc
ttcaccaacgctcgcgactgtttcctccacttgccgcggcgcctcgtggcccagctgcac
ctgctccagaatcaagctatagaagtagcctggggtcaccagcctgcattcttgagctgg
gtagaaggcaggcattttagtgatcaaggcgaaaatgtggctgaaattaacagacaagtt
ggtcagaaacttggactctcaaatggggaccaggtgtttctcaagctgtgctcccatgtg
gtgtcttgtcaacaagtcgaggtggaacccctctcagcagatgactgggagatactggag
ctgcatgctgcttctcttgaacagcatcttctggatcaaattcgaatagttttcccaaga
gccatttttcctgtctgggttgatcaacagacttacatatttatccaaattgtcgcacta
atgccagccgctgcttatggaaggctggaaatcgacactaaactccttattcagccgaag
acccgccaagccaaggagaatacgtttgcaaaagcagataacgcacaggggaaatttcgt
aattatggaggagatcaaaaaggattgacagtcactgggtctaataagacagattcagag
gttacagctgactcaccatccgtgccaagcttatggactatgataggaagtattttttct
tttgggtctgagaagaaaccagagctctcctggggtttaactgaaatgaatgcattcaaa
actatgcagtccaaagttgttcccctagacaatattttcagagtgtgcaaatcacagcct
cccagtgtgtgtgatgcaacagcagcttcggagtttcacaaacactgtgccgttcacgta
tttccgtgggaccaggaatattttggtatggagcccagctttactgtgacctacggaaag
ctaattaaactactttctccaaagcagcagcaaagtaaaacaaagcaaaatgtcctgtca
cttgaaaacgagaagcagcccttagaaccactagatcagaaaccaatcacctcggaccgc
ggtcaagaagctgctaaggcgtgtgtgctgccagtagtctggaatggactggaggagctg
aagaatgccatcaaatacaccaaaactgtagaagctctgcatcttgggaaagtctggatt
ccagatgacctgagaaagaggctaaatatagaaatgcatgcagtagtcagaataactcca
gtggaaattacccctaaaattccaagatctctaaaattacaacctagagaaaacttacct
aacgatgtaagtggagaagacgtaagagctgtgttctcttcgtggctgcagcagtgtact
accaccacgcttcctttgataatatcagaggaagaatacattaagctgagaattaaagat
ggattgaaggagttttctctaagtgtagttcattcttgggaaaaagaaaaagaaaacatt
tttttgttgagtgccagtctgctgcagaagaccacaatccaagtccttctagatcctatg
gtaaaagaagaaaacagtgaggacattgactttattcttccttttttaaagctgaactgc
ttgggaggagtgaattccttaggtgtctcctccatggaacacatcactcatagcctcctg
ggacgccctttgtctcgacagctgatgtccctagtggcgggacttaggaatggagccctt
ttattcacaggaggaaagggcactggaaaatcaactttagccaaggcggtctgtaaagaa
gcatctgacatatttgatgcccacgtggagatagttgactgtaaagctttacgagggaaa
aggcttgaaaatatacaaaaaaccctggagctggctttctcagaggcggcatggaggcag
ccttctgtgattctgctcgacgaccttgacctcgttgccggcctgcctgctgtcccagaa
cacgagcgcagccctgaggccgcgcagagccagcggctggcacatgctttgagtgatatg
atgaaagagtttatttccatgggaagtttggttgcactgacggccacgagccagtctcag
cattctctgcagccttcgctcgtctctgctcaagggactcacatatttcagtgtgtccaa
catattcaccctccggatcaggagcaaaggtgtgaaattctgcataatgtgataaaaaat
aaactggactgtgaaataagcaggttcactaatcttgacctgaaacgtatagcgaaagaa
actgaagggtttgtggctagagattttacagtgcttgtggatcgagccatacattctcat
ctctctcatcagagcatatccaccagggaagaattagctttaacaacattggacttccag
aaggctctccaaggatttattcctgcgtctctgcgaaatgtcaacttgcataaacctagg
gacctgggctgggataagattggtggattacacgaagttcggcagatactcatggatact
atccagttaccagccaagtacccagaactgtttgcaaacttgcccatacgacaaagaaca
ggagtactgttgtatggtcctcctgggacaggaaaaaccttactagctggagtgatcgcc
cgagagagtggaatgaatttcattagcatcaaggggccagagttactcagcaaatacatt
ggagcaagtgaacaagcggttcgagatatttttataagagcacaggcggccaagccctgc
atccttttctttgatgaatttgaatccattgctcctcggcgcggccacgataatacagga
gttacagatcgcgtggttaaccagttgctgactcagttggacggagtggaaggcttacag
ggtgtttatgtattggccgctacgagtcgccctgacttgattgaccctgccctgctgagg
cctggccgactcgataaatgtgtatactgtcctcctcctgatcaggtgtcacgtcttgaa
attttaaacgttctcagtgactctctacctctggcagatgatgtggaccttcagcatgtg
gcgtcagtgaccgactccttcacgggggcagatctgaaagccttactttacaacgcgcag
ctggcggccttacacggacggctgctgttctcggggctgcaggatggaagttccagttcc
gatagtgacctgagcctgtcttcgatggtttttcttaaccacagcagtggctctgacgac
tcagctggagatggggaatgtggcttggagcagtcccttgtttctctagagctgtccgag
atgcttccagatgaatcaaaattcaatatgtaccggctctactttggaagctcttatgaa
tcagaacttggaaacggaacctcttctgatttgagctcacagggcctgtctgcaccaagc
tccatgacgcaggagttttctggagttcctgggagagagcagtctttttcacgacctccc
gtgttgcgaacagcctcgcaggagggttacccagaactcacccaggaacagagagagcag
ctgcgggcagagatcagtgtcatcagaggcagataccggagccaaagtggagaggatgac
tcccttcaccagccaggaccagtcaaaaacagtctggctattagccagtcgcatttaatg
gctgctctcagtcacacaagaccatccattagtgaagaagactggaagaattttgctgaa
ctgtatgaaaactttcaaaatccaaagaagagaaaaaatcaaagtggaacaatgtttcga
cctggacagaaagtaactctagcataa
DBGET
integrated database retrieval system
