KEGG   Ailuropoda melanoleuca (giant panda): 100465474
Entry
100465474         CDS       T01329                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100465474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aml03021]
    100465474
   03019 Messenger RNA biogenesis [BR:aml03019]
    100465474
Enzymes [BR:aml01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     100465474
Transcription machinery [BR:aml03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100465474
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100465474
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 100465474
NCBI-ProteinID: XP_034504794
Ensembl: ENSAMEG00000019614
UniProt: D2GWV7
LinkDB
Position
X:complement(34605433..34606017)
AA seq 194 aa
MSTLPLRVAVVCSSNQNRSMEAHNILKKRGFSVRSFGTGTQVKLPGPAPDKPNVYDFKTT
YDQMYKDLVRKDKGLYTQNGILHMLDRNKRIKPRPERFQNCKDIFDLILTCEERVYDQVV
EDLISREQETCQLVHVINVDIQDNLEEATLGAFLICELCQCIQHIEDRDNDIEELLQEFE
EKSGRPFLHTACFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcgacgttgccgctgagagtggcagtggtatgctcaagcaaccagaaccggagcatg
gaggcgcacaacatcctcaaaaaacgcggattcagcgtccgttcctttggaacaggaact
caggtgaagctcccgggaccagcacccgacaagccaaatgtttatgatttcaagaccacc
tacgaccagatgtacaaggatctcgttcggaaggataaaggtctctacacgcagaacggc
attttacatatgctggatagaaacaagaggatcaagccccgcccggaaaggttccagaac
tgtaaggatattttcgatctgatccttacctgtgaagagagagtgtacgatcaggtggtg
gaagacctgatttccagagagcaagaaacctgccagctggtgcatgtgatcaacgtggat
atccaagacaaccttgaagaagccaccctgggggcgttcctcatctgtgagctgtgccag
tgcatccagcacatcgaggacagggataacgacatcgaggagctgctgcaggagtttgag
gagaagagcggcagacccttcctgcataccgcctgcttctactaa

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