Ailuropoda melanoleuca (giant panda): 100465591
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Entry
100465591 CDS
T01329
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform X1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aml03009
]
100465591 (LTN1)
04121 Ubiquitin system [BR:
aml04121
]
100465591 (LTN1)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100465591 (LTN1)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100465591 (LTN1)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100465591 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
zf-RING-like
zf-RING_16
HipN
Motif
Other DBs
NCBI-GeneID:
100465591
NCBI-ProteinID:
XP_011225654
Ensembl:
ENSAMEG00000008241
UniProt:
G1LNS1
LinkDB
All DBs
Position
1:14985397..15050638
Genome browser
AA seq
1766 aa
AA seq
DB search
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDTEVVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKHLAPYLKSLMGYWLMAQCDTYTPAACAAKDAFEAAFPPSKQP
EAIAFCKDEITSVLQDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKKLLCLLP
DSELDSLEEKFKSLLSQNKFWKYGKHSIPQIRSAYFELVSALCQRIPQLMKEEASKVSPS
VLLSIDDSDPIVCPALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSSVVREGGRGLATVIY
PYLLPFISKLPQTITDPKLDFFKNFLTSVVAGLSTERIKTSFSECSAVISAFFECLRFIM
QQNLGEEEIEEMLVNDQLIPFIDVVLKDPRLQDGQLFNHLAETLSSWEAKADVGKDDKTA
HSLDKVLLNFWERLSEFCVEKINEPEADVKSVSGVSNLLQVLQKPKSSLKSNKKKVGKVR
FADELPESNKENEKCVSSEGENSEGSELITEPSLTHNCSDLISPLRKKPLEDLVCKLAMM
SINYVNERKSEQHLRFLSTLLSSFSSTQVFKMLLGDEKQSIVKAKPLEVARLAQKNPAVQ
FLYQKLIGWLNEDPRKDADFLVDILYSALRCCDNNMERKYVLDDLIEGDLKWNSILQVIE
KACSSSDKHALVTPWLKGEILGEKLVTLSDHLCNKDLESSVSSESYFSERWALLSLVLSQ
HVKNDYLIGEVYVERIIVKLHETLSKAKELSEAENNDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAQSKEKTHLPDFLVCKLKNTWLSGVNLLIHQTGNKYKQSTFLCLSA
LWLKNQVQSSPLDIKSLQVLLSAVDDLLNTLLESEDTNLLAVYIGSVMPSNSEWEKMRQS
LPMQWLHRPLLEGRLSLNYECFKTDFKEQDTKKLPSHLCTSALLSKMILVALKKEVVLEN
NELEKIIAELLYSLQWYEELDNPPIFLTGFCEMLQKMNITYDNLCGLGNTSGLLQLLFNR
SMENGTLWSLIIAKLILSRSVSSDEVKRHYRRKEGFFPLTEGNMHTIQSLCPFLSKEDKK
EFIAQCIPPLLAWTKEDLCSTNGGFGHLAIFNSCLQTRSIDDGELLHGILKILISWKKDH
EDIFLFSCNLSEVSPEILGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSE
NHALYSVPLVQLFACVSCDLACELSAFFDSATLDTIGNLPVNLISEWKEFFSQGIHSLLL
PLLVTVTEESEDTSETSFQNAMLKPMCETLTYIPKDQLLSQKLPSRLVAGQKTNLPEYLQ
TLLNTLAPLLLHRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMS
LLSTQEDLLENVLGCIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPTYAETAIELSNKDPKTFFTEELQLSIRETATLPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSNVLSFQEISSVQTSTQL
FNGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagcggaccaaggggaatctgaggccttcaaacagtggccga
gctgcagaactgcttgccaaagaacagggaacggtgcctggatttattggttttggaaca
tctcagagtgacctaggctatgttcctgctattcaaggagctgaagaaattgacagtctt
gtagattctgatttccgaatggtgctgcggaaactttctaagaaagatgtcacaacaaaa
ttaaaagctatgcaggaatttggaaccatgtgtacagagagagacacagaagttgtaaaa
ggagttcttccatactggccaagaattttctgcaaaatttcacttgatcatgatcgccgg
gttcgagaagccacacagcaggcttttgaaaaacttatacttaaagtgaagaaacacttg
gctccttatttgaaaagtttaatgggctattggctaatggctcagtgtgatacttacaca
ccagctgcatgtgcagcaaaggatgccttcgaagcagctttccctccaagcaagcaacct
gaagccatagcattttgtaaggatgaaattacaagtgtgctgcaggatcatctcataaaa
gaaacacctgatacactcagtgacccacaaacggttccagaggaagaaagagaagctaaa
ttctaccgggttgtaacttgttccttattggcattaaaaaaattgctctgcctcttacct
gatagtgagcttgattctctggaggagaaatttaagtctcttttatcacagaataagttt
tggaagtatggaaaacacagtatacctcagatccgctcagcttattttgagttagtttct
gctttgtgccaacgtattcctcagctgatgaaagaggaagcatccaaagtgagcccatcg
gttctacttagcattgatgacagtgaccccattgtgtgcccagctctctgggaagctgta
ctttatacacttacaactattgaggactgttggcttcatgtaaatgcaaaaaaaagtgtg
tttccaaagctgtcatctgtggtccgtgaaggtggtcggggtctggctactgttatatat
ccttatctcttgccatttatcagcaaactccctcagaccattacagatccaaagttggat
ttcttcaaaaatttcctcacctctgtagttgcagggctatcaacagagagaataaaaacc
agcttttcagagtgctcagcagtaatatcagctttttttgaatgcttacgttttataatg
caacaaaacttaggtgaggaagaaattgaagagatgctcgtcaatgaccagttgattcct
tttattgatgtagttctcaaagacccaagattgcaagatgggcagctgtttaaccattta
gcagaaactttaagttcctgggaagccaaagcggatgtgggaaaagatgataaaacagct
cacagtttggacaaagtgctactgaatttttgggaaagactgtcagagttctgtgtggag
aagatcaatgagccagaagctgatgtgaaatccgtgtcaggtgtatctaacctgctacag
gtccttcagaagccaaagagctcactgaagtcaaataaaaaaaaagttggtaaggttaga
tttgctgacgagctgcctgaaagtaataaagagaatgaaaaatgtgtctcctcagaaggc
gagaacagtgaaggctctgaattaataactgaaccttctctcactcataattgttcagac
cttatatcaccgctaaggaagaaacctttggaagacttggtctgtaaactagcaatgatg
agtattaattatgtcaatgagagaaagtcagagcaacatctaaggttcctttctactctg
ctcagctctttctcttcaacccaagtgtttaaaatgctgttaggtgatgaaaaacagagt
attgtcaaagccaaacctcttgaagtagccagacttgcacagaaaaatcctgcagtgcag
tttttataccagaaactgattgggtggttaaatgaagatccgaggaaggatgctgatttc
ttggtggacattttgtacagtgccctccgttgctgtgacaataacatggaaagaaaatat
gtcttggatgatctcatcgagggggatctgaaatggaattctattcttcaggtcattgaa
aaggcatgttctagttcagataaacatgctttagtaactccctggctgaaaggagaaatc
cttggagagaaattggtaaccttgtcggatcatctttgtaataaggacttggaatcctcg
gtatcttctgaatcttacttctcagaaagatgggctcttctaagcttggtattatcccaa
cacgttaaaaatgattacttgattggagaagtatatgttgaaagaattattgttaaactt
catgaaactttatccaaagcaaaggaattgtcagaagctgaaaataatgactcatcagtg
tcttttatctgtgatgtggcctataactatttcagctcagcaaaaggatgcttgctaatg
ccatcatctgaagacttattattaactctctttcagttatgtgctcagagcaaagaaaaa
acacatttgccagactttcttgtttgtaaactgaaaaatacttggctctctggtgtgaat
ttattgatccaccaaactggcaataaatataaacagagtaccttcctatgtttatctgct
ctgtggctgaagaaccaagttcagtcttcacctttggatatcaaaagtcttcaggtcctc
ttgtctgctgttgatgacttgctaaatacgcttctagaaagtgaagatactaatcttctg
gcagtgtatattggaagtgtaatgccaagcaacagtgaatgggaaaagatgagacagtct
cttcctatgcagtggttgcatagacctcttttagaaggaagattgagtttgaattatgag
tgtttcaaaacagattttaaagaacaagatacaaagaaacttcccagccatttgtgtact
tccgcattattgagcaaaatgatattagttgcattgaaaaaggaagtagtcctagaaaat
aatgagcttgagaaaataattgcagaactgctctattcactgcagtggtatgaggaatta
gacaatccacctatttttctaactggattttgtgaaatgctccaaaagatgaatattaca
tatgataacttatgtggacttggtaacacttctggccttttgcagctattatttaacaga
tccatggaaaatggcaccctttggtctcttatcattgctaagttgatcctttcccgaagt
gtttcatccgatgaagtaaaacggcattataggagaaaagaaggttttttcccactaacg
gaaggtaatatgcataccattcaaagtctctgtccgtttttgtcaaaagaagacaagaaa
gaattcattgctcaatgtatacctccccttttggcctggactaaggaagatctttgcagt
actaatggaggttttggacatcttgccattttcaattcttgcctgcaaaccagaagcata
gatgatggggagctattacatggtatattaaaaattcttatatcctggaagaaagatcat
gaagatatttttcttttcagttgtaatctatcagaagtaagtccagagatactgggtgtg
aatatagaaataatccggttcctttctctgtttctgaaatactgctcatctcctttggca
gagagtgaatgggacttcatcatgtgctccatgttggcttggttggagacaacaagtgag
aatcatgcattgtattctgttccacttgtacaactgtttgcctgtgtcagctgtgatttg
gcctgtgaactcagtgcttttttcgattctgcaactctggataccattggcaatctccct
gtaaatctaatcagtgaatggaaagaatttttctcccaaggcatccacagtttgctgtta
cctcttttggtgactgttacagaagaaagtgaagatacatctgaaacatcctttcagaat
gcaatgctgaagcccatgtgtgaaacactaacatatatcccaaaagaccagctgttaagt
caaaaactcccttcaagattggttgctggccaaaaaacaaacttaccagaatatctccag
acattgttaaatacgttggccccattactcctccacagagctcgacctgtgcaaattgct
gtttaccatatgctatacaaattgatgcctgaattaccacaatatgatcaggataatcta
aagtcatatggagatgaagaagaagaaccagccttgtcaccaccggcagcgttgatgtct
cttcttagcactcaggaggacttgctagaaaatgttttggggtgtattcctgttggacag
atagttactattaagccactgagtgaagacttctgctatgttctgggatacctcctcacc
tggaaattaatacttactttcttcaaagctgcttcatctcagcttcgggcactgtactca
atgtaccttaggaaaacaaaaagtttgaataaattgctctatcacctgttcaggcttatg
ccagaaaatccaacctatgcagagacagctattgagctctcaaataaggaccctaaaaca
ttctttacggaagagctccagttgagtattagagaaacagcaactcttccctaccatatc
ccacacttggcttgttcagtctatcatatgacattaaaagacttgcctgccatggttagg
ctgtggtggaatagtagtgagaagcgtgtcttcaatattgtagatagatttacaagcaag
tatgtcagcaatgttctttcctttcaagaaatttcttctgtgcaaacaagtacacaacta
tttaatggcatgacggttaaagctcgagccactactcgagaagtgatggctacttacact
attgaggacatagttattgaacttataatacagctgccttccaattacccgctgggttca
ataactgtggagagtgggaaaagagtaggtgtggctgttcagcagtggcggaactggatg
ctgcagttaagcacttacctcacccatcagaatggaagtattatggaaggcctagcatta
tggaaaaataatgtagacaaacgttttgagggtgttgaagattgcatgatatgtttctca
gtcattcatggtttcaactattctcttcccaaaaaagcctgtagaacatgcaagaaaaag
ttccattcagcctgcttgtacaaatggtttacatctagcaacaaatccacttgtccactc
tgtcgtgagacctttttctga
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integrated database retrieval system
