Ailuropoda melanoleuca (giant panda): 100465617
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Entry
100465617 CDS
T01329
Symbol
TRIM38
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100465617 (TRIM38)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100465617 (TRIM38)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100465617 (TRIM38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-Nse
XLF
Trm112p
zf-RING_10
zf-RING_5
RDM
PsbQ
Fib_alpha
zf-RING_6
zf-RING_4
EXOC6_Sec15_N
TRAF6_Z2
Gp-FAR-1
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
100465617
NCBI-ProteinID:
XP_034516122
Ensembl:
ENSAMEG00000015923
UniProt:
G1MBT3
LinkDB
All DBs
Position
5:complement(2294643..2310684)
Genome browser
AA seq
463 aa
AA seq
DB search
MASATKKMKEEATCAICLFLMTEPVSISCGHSYCKLCIRNFLENLGPAETQSNVFSCPQC
RAPFQLASLRPNKQLGSLIEAIKEMEHEMSCEEHGERLHLFCEDESQLICWRCERSPRHT
GHRTALIEEVCQDYKEKLQNAVTNLRQLEEECMNLKVFTAKQISEWNEKIEIQKQKIQSD
FKNLQSFLQEEKKYHLWRLEKEKEQTLKRLRADEATLEQKSQELKSHILELEEKCQGSAQ
KLLQDVKDTLRRSWAMTLERQEAHSLELHTVCNVSELYFDVKKMLRSYQVNVTLDPDTAH
RELILSEDRRQVIRGFLQENLDNSSKRFSILPCILGCEGFTSGRHYFEVDVGEGTGWDLG
VCLDNVHRDVGVIQKPQSGFWAIRLCKKKGYLALTSPITSLYLGEKPLVVGIFLDCDVGV
VSFYNMTTGSHIFTFPKASFSDTLRPYFRVYQHSPLFLPSPDE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagccaccaagaagatgaaggaggaagccacgtgtgccatctgcctgttccta
atgactgagcctgtgagcatcagctgtggacacagctactgcaaactctgcatcaggaac
ttccttgagaacctgggccctgcggaaacacagtcaaatgtgttctcctgtccccagtgc
cgggctccatttcagctggccagcctccggcccaacaagcagctgggaagtctcattgaa
gccatcaaggagatggagcacgagatgtcatgtgaggagcacggagagcgcctccatcta
ttctgcgaagacgagagccagctcatctgctggcgctgtgagcggtcgccgcggcacaca
gggcaccgcacagctctcatcgaggaagtatgccaagactacaaggaaaagcttcagaat
gctgtgacaaatctgaggcaactggaagaggaatgtatgaacctgaaggtgttcaccgcg
aagcagataagcgaatggaatgagaagatagagattcagaaacaaaaaatccagtctgac
tttaagaatcttcagagcttcctgcaagaagagaagaagtaccatctatggagactggag
aaagagaaagagcagactctaaagagactgagagctgatgaggccactctggaacagaag
agccaggaactcaagagtcacatcttggaactagaggagaaatgtcagggctcagcccag
aagttgctgcaggatgtgaaagacactttgcgcaggagttgggctatgacgttggaaaga
caagaggcccactctttggagcttcatactgtgtgcaatgtttctgagctttattttgat
gtgaagaaaatgttaaggagctatcaagtcaatgtgactctggatccagatacagctcac
cgtgagctaattctgtccgaggatcggagacaagtgattcgtggattcctccaggagaat
ctggacaactcttccaagagatttagtatcttaccctgtattctgggctgtgagggcttc
acttcaggaagacattactttgaggtggatgtgggagaaggaactgggtgggacttagga
gtctgtctggacaacgttcacagggacgttggtgtgatacagaagccgcagtctggattt
tgggccattagactatgcaaaaagaaaggctacttagcacttacctctcccataacttcc
ctttatctgggggagaagcccctggttgtggggattttcctggactgtgatgttggagtt
gtatcgttttacaacatgaccactggatcccacatctttaccttcccaaaggcctccttc
tctgatactctccggccctatttccgggtttatcaacattctcctttgttcctgccttcc
ccagatgagtaa
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integrated database retrieval system
