KEGG   Ailuropoda melanoleuca (giant panda): 100465646
Entry
100465646         CDS       T01329                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03013  Nucleocytoplasmic transport
aml05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100465646 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100465646 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100465646 (NDC1)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100465646 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 100465646
NCBI-ProteinID: XP_034508845
Ensembl: ENSAMEG00000009642
UniProt: G1LSX0
LinkDB
Position
2:complement(28728668..28771337)
AA seq 773 aa
MQRRPQSPAPRWTLLRRDLSGRALKSQPALGLVSAGQFWRFGPVRTKPRRDWLGPGLGFP
QAAFEAALTGSSGGLSPFELRWRAGALSTAPLRAGAAITMATAASRPCPGGSRDILWRVL
GWRIVASIVWSVLLLPICTTVFIIFSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLSVVI
VIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFVHAAMGMLVAWCAAVITKGQYS
FLVVPCTGTESLNSPAAQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQQYK
FLRFRRSLLLLVKHSCVESLFLIRNFCIVYYFLGHIPKAWISTAMDLQIDEQFRRPLDTV
RGLLNLSLLYHVWLCGVFLLMTWYISWILFKIFATEAHLFPVQPPFSEESDECLPKVLNS
NPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQKLV
LYQEAAATNGRMVSSYSMEPKKSNSPEETTFQTPKSSHMARPSVPPLVKTSLFSSKLSTP
DVASPLGSPFGSSVVNRMAGIFDVNTCYGSPQSSQLIRRGPRLWTSAPDQQMTEFSNPSP
STSVSAESKTARQPSMIYSWIQNKREQVKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMH
IWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRISGS
LVDASYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgcagcgccgcccccagtctccggcgccccgctggacgctgcttcggagagacctttcg
gggcgggccctgaaatctcagcccgctttggggcttgtgtccgcggggcagttctggcgt
tttgggcctgtccggacgaagcctcgaagggattggttggggcctggcctgggcttccct
caggcagcgtttgaggcagccctcacagggtcctccgggggcctttctccctttgaactg
cggtggcgggcgggtgcgctgtctactgcacccctcagagccggggccgccatcaccatg
gccacggctgcgagtcggccctgccccggcgggtcgcgggacatcctgtggcgcgttttg
ggctggcggatagttgcaagtattgtctggtcagtgctgcttctacccatctgtaccaca
gtatttataatcttcagcagcattgatttatttcatcctattcagtggctttctgattct
ttcaatgatctgtatagttcctatgtaatcttttacctcctgctgctgtcagtggtaata
gtaataataagtatttttaatgtggagttctatgcagttgtgccttccattccctgctcc
agactggcactgatagggaagatcattcacccgcagcagctcatgcactcatttgtccat
gctgcaatgggaatgctcgtggcttggtgtgctgcggtgataaccaagggtcaatacagt
tttcttgtggttccctgcactggtactgagagtttaaatagccctgctgcacagacctgc
ttaaatgagtatcaccttttttttctactggctggagcatttatgggctacagctatagt
ctcctgtattttattaacaacatgaactatctgccatttcccatcatacagcaatacaag
ttcttacgcttcaggagatctctgctcttgttagttaagcatagttgtgtggaatcgttg
ttcctgattagaaatttctgcatcgtctattattttcttggccatattcccaaagcttgg
attagcactgcgatggaccttcagatagatgagcagtttcgcaggcctcttgacactgtg
cgtggcctcttgaatctctcgttactctaccatgtctggctatgtggtgtctttcttctg
atgacttggtatatctcatggatactcttcaaaatctttgccacagaggctcatctgttc
cctgttcagccaccattttcagaagagtcagatgaatgcctcccgaaggttttaaacagc
aatcctcccctcatcataaagtatttggccttgcaggacctgatgttgctttctcagtat
tctccttcacgaagacaagaagtttttagccttagccaaccaggtggacatccccacaat
tggacagccatttcaagggagtgtttgaatcttttaaatgatatgactcagaaactggtt
ctctaccaagaagctgctgctacgaatgggagaatggtgtcctcatactccatggaaccc
aagaaatcgaattctccagaagaaactacttttcagaccccgaaatctagccacatggct
cggccctcagtgccaccgctagttaagacgtcactgttttcctccaaattatctacacct
gatgttgcaagtcctctcggaagcccatttggctctagtgtcgtgaatcggatggctgga
atttttgatgtaaatacctgctatgggtcccctcaaagttctcagctaataagaagaggg
ccaagattgtggacttctgctccggatcagcagatgactgaattttctaatccttctcca
tctacctctgttagtgctgagagtaagacagcgagacagcccagtatgatttactcatgg
attcagaataaacgtgaacaggttaagaatttcttatcaaaacgggtgctgataatgtat
tttttcagtaagcacccagaggcctctattcaggctgttttttcagatgcccaaatgcat
atttgggcattggaaggtctgtctcatttagtagcagcatcatttaccgaagatagattt
ggagttgtccagactacactaccagctattcttaataccttgttgacgctgcaagaggca
gtcgacaagtacttcaaacttcctcatgcttccagtaaaccacctcggatttcaggaagc
cttgtggatgcttcctataagacgttaagatttgcatttagagcatcactaaaaactgcc
atctatagaataactactacatttggtgaacatctgaatgctgtgcaagcatctgcagaa
catcagaagagacttcaacagttcttggagttcaaagaatag

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