Ailuropoda melanoleuca (giant panda): 100465799
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Entry
100465799 CDS
T01329
Symbol
PABPC4
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4
KO
K13126
polyadenylate-binding protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03015
mRNA surveillance pathway
aml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100465799 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
100465799 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100465799 (PABPC4)
03041 Spliceosome [BR:
aml03041
]
100465799 (PABPC4)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100465799 (PABPC4)
mRNA cycle factors
Stress granule specific factors
100465799 (PABPC4)
Spliceosome [BR:
aml03041
]
Complex C
Other components
Complex C specific factors
100465799 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
100465799
NCBI-ProteinID:
XP_034505741
Ensembl:
ENSAMEG00000011535
LinkDB
All DBs
Position
2:complement(16664537..16679599)
Genome browser
AA seq
656 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGXIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDGCQSGGVPTAVQTLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
KLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKDSKAK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctctacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtatgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagcccgctgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccgtatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaatctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctgtcttgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacgcaagaggctgctgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagagggaa
gctgagctgggagccaaagccaaggagttcaccaatgtttacatcaaaaacttcggggaa
gaggtggatgacgagagtctgaaagagctgtttagccagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgagaaa
cacgaggatgccaataaggccgtggaagagatgaatggaaaagaaatcagtgggaaagtg
atttttgtaggccgtgcacagaagaaagtggaacggcaggctgagttaaagcggaaattt
gaacagctgaaacaagagagaattagtcggtatcagggggtgaatctctacattaagaac
ttggatgacaccattgatgatgagaagttaaggaaagagttttctccttttggctcaatc
accagtgctaaggtaatgttggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggcgaccaaagcagtcactgagatgaatgggnncatcgtgggctcc
aaaccactctatgttgccctggcccagaggaaggaggagagaaaggctcacctgaccaac
cagtatatgcagcgggtggccggaatgcgagcgctccctgccaacgccatcttaaatcag
ttccagcctgcagctggggggtactttgtgcccgcggttccgcaggctcagggaagacct
ccatattacacacccaaccagctagcacagatgaggcctaacccccgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccgagtgctatacgccagtctgggcctcgtccc
gctcttcgccatctggctccaactggtaatgctccggcctctcgcggcctccctactacc
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggc
gccgcccagcaagggctgactgacggctgccagtctggaggtgttcccacagctgtgcag
accttagctcctcgtgccgctgtcgctgccgccgcccctcgggctgtcgcaccttacaaa
tacgcctccagtgtccgcagccctcaccctgccatccagcctctgcaggcaccgcagcct
gcggtccacgtgcaggggcaggagcccctgaccgcctccatgctggctgcagcgcccccc
caggagcagaagcagatgctgggagaacgtttgttcccactcatccaaaccatgcattcc
aaactggcggggaagatcacgggcatgctgctggagatcgacaactctgagctgctgcac
atgctggagtcccccgagtctctccgctccaaggtggacgaagctgtggccgttctgcag
gctcatcacgccaagaaagaggctgcccagaaggattcaaaagccaaataa
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integrated database retrieval system
