KEGG   Ailuropoda melanoleuca (giant panda): 100465908
Entry
100465908         CDS       T01329                                 
Symbol
SORT1
Name
(RefSeq) sortilin isoform X3
  KO
K12388  sortilin
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04142  Lysosome
aml04722  Neurotrophin signaling pathway
aml04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100465908 (SORT1)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    100465908 (SORT1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    100465908 (SORT1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR
Other DBs
NCBI-GeneID: 100465908
NCBI-ProteinID: XP_011223269
Ensembl: ENSAMEG00000004701
LinkDB
Position
2:complement(76480002..76522948)
AA seq 695 aa
MTFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSGKVILTAEVSGGSHGGR
IFRSSDFAKNFVQTNLPFHPLTQMMYSPQNSDYLLALSTENGLWVSKDFGGKWEEIHKAV
CLAKWGSENTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIGVKIYSFGLGGRFLFAS
VMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTI
FTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGR
WKHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLSEPKAVGIVIAHGSVGD
AISVMIPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSHPINVIKFSTDEGQC
WQTYMFTREPIYFTGLASEPGARSMNISIWGFTESFLTRQWVSYTIDFKDVLERNCEEKD
YTVWLAHSADPGDYGDGCILGYKEQYLRLRKSSVCQNGRDYVVTKQPSVCPCSLEDFLCD
FGYFRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDRCQGGVNPVREVKDL
KKKCTSNFLSPEKQNSKSNSIPIILATVGLMLVTVVAGVLIVKKYVCGGRFLVHRYSVLQ
QHAEANGVDGVDALDTAPHTHKSGYHDDSDEDLLE
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgactttcggacagtccaagctatatcgaagcgaggactatgggaagaactttaaggat
attacaaatctcatcaacaacaccttcattcggactgagtttggcatggctatcggtcct
gagaattctgggaaggtgattttaacagcagaggtgtctggaggaagtcacggaggaaga
atcttcagatcatcagattttgccaagaactttgttcagaccaatctccctttccatcct
ctgactcagatgatgtatagccctcagaattctgattatcttttagccctcagcactgaa
aatggcctgtgggtgtccaaggattttgggggaaaatgggaagaaatccacaaagcagta
tgtctggccaaatggggatcagaaaacaccatcttctttaccacctatgcgaacggctcc
tgcaaagctgaccttggggcactggaattatggagaacttcagacttggggaaaagcttc
aaaacgattggtgtgaaaatctactcatttggtctcgggggacgtttcctttttgcctct
gtgatggctgataaggatacaacaagaaggattcatgtgtcaacagatcaaggggacaca
tggagcatggcccagctaccttcggtggggcaggaacaattctattctattctagcagct
aatgatgacatggtgttcatgcatgtagacgaacctggagataccggatttggcacaatc
tttacctcagatgatcgaggcatcgtctactccaagtccttagaccgacatctctacacc
accacaggtggcgagacagactttaccaatgtgacctccctgcgtggggtctacataaca
agtgtgctctcagaagataattctatccagactatgatcacttttgaccaaggaggaagg
tggaagcatctgaggaaacctgaaaacagcgaatgcgatgctacagcaaaaaacaagaat
gagtgcagccttcatattcacgcttcctacagcatctctcagaagctaaacgttccgatg
gccccactctcagagcctaaggccgtcggcatagtcattgcccacgggagtgtaggggat
gccatctcagtgatgatcccagatgtgtacatctcagatgatgggggttactcctggacc
aagatgctggaaggaccccactattacaccatcctggattccggaggcatcattgtggcc
attgagcacagcagccatcctatcaatgtgattaagttctccacagatgaaggtcagtgc
tggcaaacctacatgttcaccagggagcccatctactttactggcctcgcttcagaacct
ggagctcggtccatgaatatcagcatttggggtttcacagaatcgttcctgactcgccag
tgggtctcctacaccattgactttaaagatgtcctcgaaaggaactgtgaggagaaggac
tataccgtatggctggcccactccgcggaccctggagattatggagacggctgcatcttg
ggctacaaggaacagtacctgcggcttcgcaagtcgtccgtctgccagaacggtcgggac
tacgttgtgaccaagcagccgtccgtctgtccctgctccctggaggacttcctctgtgat
tttggctacttccgtccagagaatgactccaaatgtgtggaacagccagaactaaagggc
cacgatctggagttttgtctgtacggcagagaggagcacctgacaacaaatgggtaccga
aaaattcccggagacagatgccagggtggtgtgaatccagtccgagaagtaaaagacttg
aaaaagaaatgcacaagcaactttttgagtcccgaaaagcagaactccaagtcaaattct
attccaatcatcctggccaccgtgggattgatgctggtcaccgtcgtagcaggggtgctc
attgtgaagaaatacgtctgtgggggcaggttcctggtgcatcggtactccgtgctgcag
cagcacgccgaggccaacggtgtggatggtgtggacgccctggacacggccccccacact
cataagagtggttatcacgacgactcagatgaggacctcctggaatag

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