Ailuropoda melanoleuca (giant panda): 100466131
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Entry
100466131 CDS
T01329
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100466131 (SUPT6H)
03036 Chromosome and associated proteins [BR:
aml03036
]
100466131 (SUPT6H)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100466131 (SUPT6H)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100466131 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
100466131
NCBI-ProteinID:
XP_002912369
Ensembl:
ENSAMEG00000004744
UniProt:
G1LDR5
LinkDB
All DBs
Position
13:complement(4736171..4768549)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLSALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDDTGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKQKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcagaggaagagtacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaagaggaggatgacgatgaggaggag
gaggaggaaaacctagatgaccaggatgagcaaggcaatctgaaaggctttatcaatgat
gatgatgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgatgaggatgacgacgaggaggaatatggcaaagaagaacat
gagaaagaagctatcgcagaggaaatattccaggatggggagggggaagaagggcaggaa
gccgtggaggcccccatggctcctccagaggaggaggaggaagatgatgaagaatcagac
attgatgacttcattgtggatgatgatggacagcctctgaaaaaacctaagtggcggaaa
aagcttcccggatacacagatgcggccctgcaggaagcccaggagatttttggtgtggac
ttcgactatgatgagtttgagaaatacaatgagtatgatgaagaactggaggaagagtat
gagtatgaggatgatgaggctgagggtgagatccgagtgcgccccaaaaagaccaccaag
aaacgtgtgagccgcaggagcatctttgagatgtatgagcccagcgagctggaaagcagc
cacctcacggatcaggacaatgaaatccgagccaccgacctgcctgagaggttccagctc
cgctccatcccagttaagggggctgaagatgatgaactagaagaagaagctgactggatc
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccgaccagcagcttcagtcggaaagggcccagcacaattcagaagattaaa
gaagccctgggcttcatgcgaaatcaacactttgaggtgccttttattgctttctaccgt
aaggagtatgtggagcctgagttgcacatcaatgacctgtggagggtgtggcagtgggat
gaaaagtggacccaactgaggatccgcaaagagaacctgacacggctatttgagaagatg
caggcttatcagtacgagcagatctccgctgaccctgacaaaccccttgctgatggcatc
cgagctctggataccaccgacatggagaggcttaaggatgtacagtcaatggatgagctg
aaagatgtctacaaccatttcttgctttattatggtcgtgatatccccaagatgcagaat
gctgccaaggccagccgcaaaaagctgaagcgtgtgcgggaagagggagatgaggaaggt
gagggggaagaggcagaagatgaggagcagaggggcccagagctcaagcaggcctcccgc
cgagacatgtacaccatctgccagagcgctgggctagatggtctggccaaaaagtttggg
cttactccagagcagttcggggaaaacctccgggacagctaccagcggcacgagacagag
cagttccctgcggagcctttggaactggccaaggattacgtttgcagccagtttcctact
ccagaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
cttgtccgacaggtgctgaggcagaccttccaggagagagccaagcttaatataactccc
accaagaaaggtagaaaggatgtggatgaggcccactacgcttattccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatatgcttggccgaa
gatgaagggctgctcaccattgacatcagcatagacatgaagggggtagaaggctacggc
aatgatcagacatatttcgaagagatcaaacagttttactaccgagatgagttcagccac
caggtgcaggagtggaacaggcagcgcaccatggccatcgagcgagctttgcagcagttc
ctctacgtgcagatggccaaagagctcaagaacaagctgctggctgaagccaaagaatat
gtcataaaggcctgtagccgaaaactctacaactggttaagggtcgcaccctaccggcca
gatcaacaggtagaggaagatgatgactttatggatgagaaccaagggaagggcatccgc
gtcctaggcatcgctttctcctctgccagagatcaccctgtgttctgcgccctggtcaat
ggcgaaggagaagtgacagacttccttcggctgcctcattttaccaaacggcgaactgca
tggagagaggaagaacgggaaaagaaggctcaggacattgaaactctaaagaaatttctt
ctgaacaaaaagcctcatgtggtgacagttgcaggagaaaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtgcatgagctggaccagggccaacagctgtcctctatt
ggggtggagctggttgataatgagttggccattctctatatgaacagcaagaaatcggag
gcagagttccgggattaccctccagtgctgagacaggccgtctccctggcccggcgcatc
caggaccctctgattgaatttgcccaggtgtgcagctctgatgaagacatcttgtgtctc
aagtttcatcccttgcaggagcacgtggtgaaagaggagctgctcagcgccttgtactgt
gaatttatcaatcgagtcaatgaggttggggtcgatgtcaaccgtgccatcgcccacccg
tacagccaggccttaatccagtatgtctgtggcctaggacctcgaaaagggacccatctc
cttaagatcctgaagcagaacaacaccaggctcgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacacggcc
tccctgggggacagcactgactcatacattgaagttcttgatggttcccgagtccaccct
gagacctatgagtgggccaggaagatggcggtggatgctctggaatacgatgagtcagct
gaggatgccaaccctgcaggagcccttgaagagatcttggaaaacccagagcgactgaag
gacctggaccttgatgcctttgcagaagaactggagaggcagggctatggtgacaagcac
atcaccctgtacgacatccgggcggagctgagttgccggtataaggacctgcggacagcc
taccgctctccaaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcatcatctgcaacgtcaccggcattgcccacaggcgtccccag
ggggagagctatgaccaggcgatccgcaacgatgatacagggctctggcagtgccccttc
tgccagcaagacaatttccctgaactaagtgaggtctggaaccactttgacagcggttca
tgcccaggccaagccattggggtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaagttcctcagtgacaaagtggtaaagcggccggaggagcgagtgaaggtggga
atgaccgttcactgccgcatcatgaagattgacattgagaagttcagcgccgaccttacc
tgccgaacctcagacctcatggacaggaacaacgagtggaaactgcccaaggacacctac
tatgacttcgatgccgaagcagcagaccacaagcaggaggaggacatgaaacagaagcag
cagcggaccacatacatcaagcgagtgatcgcacacccatccttccataatataaacttc
aagcaagcagaaaagatgatggagaccatggaccagggtgacgtgatcatccgcccaagt
agcaagggtgaaaatcacctgaccgtgacctggaaggtcagtgacggcatttaccagcac
gtggacgtgcgggaagagggcaaggaaaatgccttcagcctgggagccaccctttggatc
aacagtgaggaatttgaagacttggatgagattgttgctcgctatgtccagcccatggca
tcctttgcccgtgaccttctgaaccacaagtattaccaggactgcagtggtggtgaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtaacggtgactccagaaggattccggtaccggggccaaatc
ttccctactgtgaatggacttttcagatggtttaaggatcactaccaggatcctgtaccg
ggcatcacccccagtagcagtagcaggacccggacacctgcttctatcaatgccacccca
gccaacatcaaccttgcagatctgacgcgagctgtgaatgccctaccccagaacatgacc
tcacagatgttcagtgccattgcggccgtgacaggccaaggacagaaccctaacgccacc
ccagcccagtgggcctccagccagtatggctatggcggcagtggagggggcagcagcgct
taccacgtgttcccaacgccagcccagcagccagtggccacaccgctaatgacccccagt
tactcctacacaacccccagccagcccatcaccacaccacagtaccaccagctacaggcc
agcaccaccccacagtctgcccaggcccagccccagccctcttccagctctcggcaacgg
cagcagcagccaaagtccaacagccacgctgccatcgactgggggaagatggcagagcag
tggctacaggagaaggaagccgagcggcggaaacagaagcagcggctgacgcctcggccc
tctcccagccccatgatcgaaagcacccctatgtccattgccggcgatgccaccccgctt
ctggatgagatggatcggtag
DBGET
integrated database retrieval system
