Ailuropoda melanoleuca (giant panda): 100466137
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Entry
100466137 CDS
T01329
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aml03016
]
100466137 (TRUB1)
Enzymes [BR:
aml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
100466137 (TRUB1)
Transfer RNA biogenesis [BR:
aml03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100466137 (TRUB1)
Prokaryotic type
100466137 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
MoCoBD_2
Motif
Other DBs
NCBI-GeneID:
100466137
NCBI-ProteinID:
XP_019661590
Ensembl:
ENSAMEG00000014931
UniProt:
G1M8S5
LinkDB
All DBs
Position
6:114289600..114326001
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AA seq
350 aa
AA seq
DB search
MAAAEAAVVSSSSLETDTALVPETAGTAAAMAATSSATAAAAAVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGVLQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGAVVAAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQCLEHCSSLLPAELALKKSKPEESNEQVLSCEYMTLSETKGEDDVIKTS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcagtggtatcgtcgtcatctttggaaacagacacagccctg
gtccctgaaactgcaggaacagccgcagcaatggccgccacctcatcagcgacggctgca
gccgcggccgttgcggccgctgccagaaccggatccgaagccagggtctccaaggccgct
ttggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgctagcagaagctggaatgcct
tctccagaatggaccaaaaggaaaaagcagactctgaaaattggacatggagggacgcta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgacc
agtatgttgtcagggtccaagaggtatattgccattggagaactggggaaagccactgac
acgctagactctactgggaaagtaacagaagaaaaaccttatgataaaataacacaagaa
gatattgaaggcgttctacagaaatttactgggaatataatgcaggtacctcccctctat
tccgcattaaagaaggatggacagagactttcaaccttgatgaagagaggcgcagtagta
gcagccaagcctgccaggcctgttaccgtatacagtctctcccttcaaaaattccagcca
ccgtttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggcaaagaactctcttcctgtgccaatgtcctagagctgacccgaaccaaacag
ggaccgtttacactagaagagcatgcccttcctgaagacaaatggactattgatgacatt
gcacagtgtctggaacattgctcatctcttctcccagcagagttggcacttaaaaagtca
aaacctgaggagtctaatgaacaagttttgagctgtgaatatatgactctaagtgagaca
aagggagaagatgatgtaattaagacatcttaa
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