Ailuropoda melanoleuca (giant panda): 100466260
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Entry
100466260 CDS
T01329
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100466260 (TRIM50)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100466260 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Prok-RING_4
zf-Nse
U-box
Baculo_IE-1
zf-ANAPC11
zf_RING_Vps8_fungal
TRIM_CC
zf-RING_4
zf-RING_6
Trimer_CC
Trm112p
COG2_N
DUF1644
Relaxase_C
DUF7575
Motif
Other DBs
NCBI-GeneID:
100466260
NCBI-ProteinID:
XP_011228459
Ensembl:
ENSAMEG00000011139
LinkDB
All DBs
Position
10
Genome browser
AA seq
487 aa
AA seq
DB search
MAWQVSVPELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHPDSELRCPVCRQEV
DSSSSPPNVSLARVIEALQFPGDPEPKVCEHHRNPLSLFCERDQELICGLCGLLGSHQHH
RVTPVSTVYSRMKEELAALISDLKQEQKKVDEHIAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGLEGHTRGLVASLDMQLEQAQGTQERLVQAEHVLEQFNNESHHEF
IRKYHSMTSRAELQQARPLEGTFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
ATAHPLLELSKGNTVVQCGLLAQRHASQPERFDYSTCVLASRGFSWGRHYWEVVVGNKSD
WRLGVIKGTASRKGKLSKSPENGVWLIGLKEGRVYEAFGCPRVPLPVAGHPHRIGVYLHY
EHGELTFFDADRPDDLRLLYTFQADFQGKLYPILDTCWHERGSNALPMVLPAPSGPAHLT
PPQPTKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaggtgagtgtgcctgagctggaggaccgccttcagtgccccatctgcctg
gaggtcttcaaggagcccatgatgctgcagtgtggccactcctactgcaagggctgcctg
gtgtccctgtcccgccacccagactcagagctccgctgcccagtgtgccgacaggaggtg
gatagcagcagctccccacccaacgtctccctggcacgggtgattgaagccctacagttc
cctggggacccagagcccaaggtctgtgagcaccaccggaacccactcagcctcttctgt
gagagggaccaggagctcatctgcggtctctgtggcctgctgggctcccaccagcaccac
cgcgtcacgcccgtctccactgtctacagccgcatgaaggaggagctagcggctctcatc
tctgacttgaagcaggagcagaagaaggtagatgagcatattgccaaactggtgaacaac
aggacccggattgtcaatgaatctgatgtcttcagctgggtgattcgtcgcgagttccag
gagctgcaccacctggtggatgaggagaaggcccgctgcctggaggggttggagggtcat
acccgcggcctcgtggcctccctggacatgcagctggagcaggcccagggcactcaggag
cggctggtccaggccgagcacgtgctggagcagttcaataatgagagtcaccacgagttc
atccggaaatatcactccatgacctccagagcagagctccagcaggcccggcctttggaa
ggcactttcagccccatctccttcaagccaggcctccaccaggctgacatcaagctgacc
gtgtggaagaggctcttccgaaaagttctgccagccccggagtccctgaagctagaccct
gccaccgcccaccccctcctggaactctccaagggcaacacggtggtgcagtgtgggctt
ctggcccagcggcatgccagccaacctgagcgctttgactacagcacttgtgtcctggcc
agccggggcttctcctggggccgtcactactgggaggtggtggtgggcaacaagagcgac
tggcgcctgggcgtcatcaagggcacagccagtcgcaagggcaagctgagcaagtcccct
gagaacggcgtgtggctcatcggcctgaaggagggtcgtgtgtatgaggcctttggctgc
cctcgggtgcccctgcccgtggccggccacccccaccgcattggcgtctacttgcactat
gagcacggagagctcactttctttgatgccgaccgccccgatgacttgcggctgctctac
acattccaggctgacttccagggcaagctctaccccatcctggatacgtgctggcacgaa
aggggcagcaacgcgctgccgatggtgctgcccgcgcccagtgggcctgcccacctcacc
cccccacagcccaccaagctgtag
DBGET
integrated database retrieval system
