Ailuropoda melanoleuca (giant panda): 100466427
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Entry
100466427 CDS
T01329
Symbol
KRT39
Name
(RefSeq) keratin, type I cytoskeletal 39
KO
K07604
type I keratin, acidic
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04382
Cornified envelope formation
aml04915
Estrogen signaling pathway
aml05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
100466427 (KRT39)
09158 Development and regeneration
04382 Cornified envelope formation
100466427 (KRT39)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
100466427 (KRT39)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aml04812
]
100466427 (KRT39)
04147 Exosome [BR:
aml04147
]
100466427 (KRT39)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100466427 (KRT39)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100466427 (KRT39)
Exosomal proteins of other body fluids (saliva and urine)
100466427 (KRT39)
Exosomal proteins of colorectal cancer cells
100466427 (KRT39)
Exosomal proteins of melanoma cells
100466427 (KRT39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
PFam54_60
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
100466427
NCBI-ProteinID:
XP_002924991
Ensembl:
ENSAMEG00000008358
UniProt:
G1LP11
D2HR36
LinkDB
All DBs
Position
13:complement(25160672..25167905)
Genome browser
AA seq
484 aa
AA seq
DB search
MDAKGCTITTSCSTPHQSCSRITNCRTISSNASCQHGSLKANSCPPTGHVPRAARPIPCF
YFTPVCLINNFNACCLLDDCGWCGEGINSNEKETMQILNERLANYLEKVRILEQENAELE
HKIQEECNKELCVVCPDYRSYYATIEELQQKILCTKAENSRLVSQIDNTKLAADDLRAKY
EAELSGRQLVEADANGLQQILNALTLAKADLEAQVQSLREELLCLKNNHEEEIKSLQSQL
GDRLNIEVTAAPSVDLNRVLQEMRCQYESIMETNRREVEQWFNTQMERLNQQVVSSSQQQ
QCCLKEITELRCTGNALEIELQAQHRMRDSQECILVETEARYTALLAQIQCLIDNVEAQL
AEIRCALERQNQEYEILLDVKSQLECEIATYRSLLESSDVKLPYNPCATKCEPPSKTSAM
GCPAPVYNTSSSASCRTHEPRSAYRVLPRILVKICTTTQEIKDGKIISSHEHVQPCFIIR
TARV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaagggctgtacaataacaacttcttgttcaacgccacaccaaagctgctct
aggattacaaactgtcggaccatttcttctaacgccagctgccaacatggcagtcttaaa
gccaacagctgcccaccaactggccatgttccgagggctgccagacccattccttgcttt
tatttcacacccgtctgcttaataaacaacttcaatgcctgttgccttctggatgactgt
ggctggtgtggtgaaggcatcaacagtaacgagaaagagaccatgcaaatcttgaacgag
cgccttgctaactacctggagaaggtgcggatcttggaacaagagaatgcggaactggag
cacaaaatccaggaggagtgtaacaaggagctctgtgttgtatgtcctgactaccggtcc
tactacgctaccattgaggagctccagcagaagatcttgtgtaccaaggctgagaattcc
agactggtctcacaaattgacaacaccaaactggctgctgatgacttgagagccaagtac
gaagctgagctgtccggacgccagctggtggaggcagatgccaacggcctacagcagatc
ctgaatgcactgaccctggccaaggctgacctggaggcacaagtccagtctttgagggag
gagctcctctgcctcaagaacaaccatgaggaggaaatcaaatccctgcagagccagctt
ggggacagactcaacattgaagtgaccgctgccccttctgttgatctaaaccgcgttcta
caagaaatgagatgtcagtatgagtccatcatggagacaaaccgcagagaagtggaacaa
tggttcaacacacagatggagcggctgaaccagcaggtggtgagcagctcccaacagcag
cagtgctgcctgaaggagatcactgagctgagatgcaccgggaatgctctggagattgaa
ctgcaggcccagcaccgaatgagagattcccaggaatgcatcctggtggagacagaggcc
cgctacacagccttactggcccagatccagtgtctgattgataacgtggaggctcagctg
gcagagatccggtgtgccctggaaaggcagaaccaagaatatgagattctgctggatgtc
aagtcccagctggagtgtgagattgccacgtaccgcagtcttctggagagttcggatgtc
aagcttccctataacccgtgtgccaccaaatgtgagcctcccagtaagaccagcgccatg
ggatgcccagccccagtttacaacacatcatcctcggcttcctgcaggacacacgagccc
cgcagcgcctacagagtcctgccccgaatactggttaaaatctgcaccaccacgcaggag
attaaggatggcaaaatcatttcttctcacgagcacgtgcagccttgcttcatcatcaga
actgccagagtctaa
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