Ailuropoda melanoleuca (giant panda): 100466651
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Entry
100466651 CDS
T01329
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100466651 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100466651 (USP42)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100466651 (USP42)
Peptidases and inhibitors [BR:
aml01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100466651 (USP42)
Ubiquitin system [BR:
aml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100466651 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100466651
NCBI-ProteinID:
XP_034525678
Ensembl:
ENSAMEG00000006853
UniProt:
G1LJX5
LinkDB
All DBs
Position
10:complement(4551106..4594530)
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AA seq
1332 aa
AA seq
DB search
MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
ITHSTHSPGQSSPRPVISQRVVNNKQAASGFIGPQLPSHMIKNPPHLNGTGPLKEAPSSS
MSSPSGNSSVSRAGSVNASTSVPNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQPN
LHSGSLENPTKPVPSSTVTNSSAIQSTSSAPTTAVSSKVTKQMTPSESCSKPVMNGKSKL
SSSVLVPYGAESSEESDEEAKGLGKENGLGTIESSNSSVQDAEDDESSLLELREPLALNG
ADSTDSDLKENGLSCDGASCQVPPALHSENPFSKANGLPGKLMPAPLPLLPEDKILETFK
LSSKAKGSTEETSAPGTEEGPAGDPGAELEAGSPSPKSREKLETLTSLSSKLKALPPLDP
SVKSTKEEVSENILARPEESLPSANTLCNSTKNTTGADPLPKLCDPGDLTDDQSRPPQAV
SGALTESPRASAAVETAGSSSPSPPVHPEGACEHELLVCVSRDTCLDLEDPPGGTGMAAE
DSPSPQVDEITEDHSEGGPEQSNGEKCEENKVGQKVPDHSPVKEKISILRKVDRGHYRNR
RERSSSGERARESGSQTAEHYHRKRHSSVRERAGQERYRTQHCNGGQPHPCPSQRLSPGE
HRSLGRYSRHHSRSRGASDREWGRYHHSESEHSWGREKHYPDRLRWDKCRYYHDRYAPYT
AREAREWKPFHGPREYAKAGPYGGRPYKDYYRGRQGYEPAAKGKDRHHFGSPRAGPPHAL
LPYPEKYPHEKIALVAEDTNCNLADRFHEHENAKSRKRRYDSVENSDGHVEKKAWRGFQK
DPLEEPKVKKHKKSKKKKKSKDKHRGRDSRHQQDSDLSVACSDADLHRHKKKKKKKKRHS
RKSEDFAKDLEPHLPKAASRETVDRFRRTDGAFPLTDGLPLEGVGPFREKRKHLRMGSRD
DRCPLSECGQGD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcagcctatcagaatcagcct
ggcagctcggaggcggtctcacctggagacatggatgcagggtctgccagctggggagct
gtgtcttcgctaaatgatgtttcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcaagttcatctgtacctgataaatcaaaaccatcaccacaaaaggatcaa
gccctaggtgatggcattgctcctccgcaaaaagttcttttcccatctgagaagatttgt
cttaagtggcaacagactcatagagttggagccgggctccagaatttgggcaatacctgc
tttgccaatgcagcactgcagtgtttgacctacacgccacctcttgccaattacatgcta
tctcacgaacactccaagacatgtcatgcagaaggattttgtatgatgtgtacaatgcaa
gcacatatcacccaggcactcagtaatcctggggatgttattaagccgatgtttgtcatt
aatgagatgcggcgtatagctaggcacttccgctttggaaaccaagaagatgcccacgaa
tttcttcagtacactgttgatgctatgcagaaagcatgcttgaatggcagcaataaattg
gacagacacacccaggctaccacccttgtttgtcagatatttggaggatacctaagatct
agagtcaagtgtttaaattgcaaaggtgtctcagatacattcgatccatatctcgatata
acgttggagataaaggccgctcaaagtgtgaacaaggcattggagcagtttgtgaagcca
gagcagctcgacggggaaaactcttacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggttcactatacacagatcctctaatgttcttacactttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggatgtgaaataccctgaataccttgatatt
cgaccatacatgtctcagccgaatggagaaccgatcatctatgtcctgtacgcggtgctc
gtgcacactggctttaactgccatgccggccactacttctgctacatcaaagctagcaat
ggcctctggtatcagatgaatgactccatcgtgtccaccagtgatattagatcggtgctc
agtcaacaagcttatgttctcttttatatcaggtcccacgatgtgaaaaatggaggtgaa
atcactcattccactcacagtcccggccagtcctcgccccgacccgtgatcagccagcgc
gttgtcaacaacaaacaggctgcgtcagggtttatcggaccacagctcccctctcacatg
ataaagaacccacctcacttaaatgggaccggaccattgaaagaagcaccaagcagttcc
atgtcaagtcctagtggaaattccagtgtcagccgggctggttctgttaatgcttcgact
tctgttccaaactggtccgttaacaggccctcagtgattccagaacatcccaagaaacaa
aaaatcacgatcagtattcacaacaagttacctgttcgtcaaggccagtcccagcctaac
cttcacagcggttctttggagaaccccaccaagcctgttccctcttctaccgttaccaat
tcttctgcaatacagtctacctcgagcgcacctacgacggcagtttccagtaaagtcaca
aagcagatgaccccgagcgagtcctgctctaagcccgtgatgaacggcaagtccaagctg
agctccagcgtcctggtgccctacggcgccgagtcgtccgaggagtctgacgaggaggcg
aagggcctgggcaaggagaacggtctcggtacgatcgagagctcgaactcttctgtgcag
gatgcagaggatgacgagtcctctctgctcgagctccgagagccccttgctctaaatggt
gctgatagtacagacagtgacctgaaggaaaacggtctgtcttgtgacggtgccagttgc
caagtcccgcctgctctacactcagaaaatcccttttctaaggcgaacggtctgcccgga
aagttgatgcctgctcctctgccgctcctcccagaagacaaaatcttagagaccttcaaa
ctcagcagcaaggcaaaaggctcgacagaagaaaccagcgcacctggaacagaggaaggt
cctgcaggggaccccggcgcagagctggaggctggcagtccctctcccaagtcccgagag
aagctggagaccctcacgagccttagcagcaagttgaaggctctgccgcccttagacccc
agcgtcaaatctaccaaagaagaagtctccgagaacattttagcaagacccgaggagtct
ttgcccagtgccaacactctttgcaacagcactaaaaataccacgggggccgatccactc
cctaaactgtgtgaccccggggatttaacggatgaccagagcagaccaccgcaggccgta
tcgggggcgttaacagagagcccacgggcctcggccgcagtggagacagcggggagctcg
agcccaagccccccggtacatcccgagggtgcctgtgagcacgaactcttggtctgcgtc
agtcgagacacgtgcctggacttggaggaccctcctgggggcacaggcatggctgccgag
gactcgccctcccctcaagtagacgagatcacagaagatcattcagaagggggccccgag
caaagtaacggggagaaatgtgaagaaaataaggttggacaaaaagttccagatcattct
ccagttaaggaaaaaatcagtatcctcagaaaagttgatcgaggacattatcgcaaccga
agagagcgttcgtccagtggcgaacgcgcgcgggagagcgggagccagaccgcggaacac
taccaccgaaagcggcactcatccgtgcgggagcgggccgggcaggagcgctacaggacg
cagcactgcaacgggggccagccccacccctgtcccagccagaggctcagccccggcgag
caccgctccctgggcaggtacagccgccaccactcccgcagcagaggcgcgtcggacagg
gagtggggcaggtaccaccactccgaaagcgagcactcctggggccgggagaagcactac
ccggacagactgcggtgggacaaatgcaggtattaccacgacaggtacgccccgtacacg
gccagggaggcgcgcgagtggaagcccttccacggcccccgcgagtacgccaaggcgggc
ccgtacggcggccggccctacaaggactactacagaggcaggcagggctacgagccggcc
gccaaggggaaggaccggcaccacttcggcagcccccgggcaggcccgccccacgccctc
ctcccgtaccccgagaagtacccccacgagaaaattgcacttgtagccgaagacaccaat
tgtaacctcgccgatcggtttcacgaacacgagaatgccaagtcccggaaacggaggtac
gacagtgtggagaacagtgatggtcacgtcgagaagaaggcctggaggggcttccagaag
gatcccttggaagagcctaaagtgaagaagcacaaaaaatcaaagaagaaaaagaaatcc
aaagacaaacaccgaggccgagattccaggcatcagcaggattccgatctttcagtagca
tgctctgatgctgacctccacagacacaaaaaaaagaagaagaaaaagaagaggcactcc
aggaaatccgaggactttgctaaggacttagaaccgcacctacccaaggccgccagccgt
gagactgttgaccgtttccggagaacggacggcgccttccccctcaccgatggcctgcct
ctggaaggtgttgggcccttccgtgagaagagaaaacacttaaggatgggaagcagggat
gacaggtgtcctctgtctgagtgtggccagggtgattga
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integrated database retrieval system
