Ailuropoda melanoleuca (giant panda): 100466819
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Entry
100466819 CDS
T01329
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100466819 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100466819 (SCARF1)
Membrane trafficking [BR:
aml04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100466819 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_2
EGF_TEN
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
100466819
NCBI-ProteinID:
XP_034496507
Ensembl:
ENSAMEG00000029343
LinkDB
All DBs
Position
13:1959431..1970794
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AA seq
754 aa
AA seq
DB search
MGLRLLPLLLLWTQGTRGSKLDPNGQHVCMASSPSAELQCCPGWRQKDQECTIPICEGLD
ACREDEVCVKPGLCRCKPGFFGAQCNSRCPGQYWGPDCREICACHPHGQCEPATGVCHCQ
ADRWGGRCEFACACGPHGRCDPATGACRCESGWWSSTCRRPCQCNPAAARCDQTDGSCRC
EPGCPSLPSCGHCKQKEPCSADTGSCESCEPGWNGTQCHQPCPAGTFGESCRQLCPHCRL
GEACQPDTGHCQRCDPGWLGPRCEDPCPPGTFGEGCSSACPTCVQGTCDAVTGECVCNAG
YWGPSCNTSCPSGFHGNNCSVPCECPEGPCNPVSGACQLGPHGQDAALIAGVLGPLLLLL
LGIILCACCCWAARSDPKDRPARDGAAVSRVKLQVWGALSSLGSALPCGSFSSHKLPWVT
VSHHDPEIPFNHSFIEPPSAGWASDDSFSSDPESGEDESPAYCVPPQEGMVTVAHGEFPE
ASVAGGPVPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFAPQSRRSSGEISSPLRKP
KRLSRGAQLGPESQEAEESTGSEKAEMDETLPGAASPRDSATGRRRLPLGGRTVAERVEA
IEGSVLEGSGSVTTIYMLAGTPQSSEGPVRSVLRRFGSFQKGQAEPKVKSAIPKPPRRAL
SRNKGIPGLASGSASQSPSLSPSDELTRPLESAGTGPEEVARGLGIGTKSSGRAQELAPE
GGPQEQDPQKLADEEGQEEPQYENVVPISGSPAP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaggctgctcccactgttgctgctctggacacaggggacccgggggtccaag
ctggaccccaatgggcagcatgtctgcatggccagcagcccctctgctgagctccagtgc
tgccctggctggaggcagaaagatcaagaatgcactatccctatctgtgaggggctagat
gcctgccgggaagatgaagtatgtgtgaaaccaggcctctgtcgatgcaaacctggattc
ttcggggcccagtgcaattcccgctgcccgggccagtactggggccccgattgccgtgag
atctgtgcctgccacccacacggccagtgcgagccggccacgggcgtgtgccactgccaa
gcggaccgctggggcggccgttgcgagttcgcgtgcgcctgcggcccccacgggcgttgc
gaccccgcgacgggcgcgtgccgctgcgagtctggctggtggtcgtccacttgccgccgt
ccgtgccagtgcaacccggcggcggcgcgctgcgatcaaacggacggctcctgccgttgc
gagccgggctgtccttctcttcccagctgtggccactgcaagcagaaggagccatgctct
gcagacacaggcagctgtgagtcctgcgagccaggctggaatggaacccagtgccaccag
ccctgcccagctggcacctttggcgagagctgcaggcagctgtgcccccactgccggctt
ggggaggcctgtcagccagacactgggcactgtcagcgctgtgaccctgggtggctgggg
cctaggtgtgaagacccctgcccgcccggcacatttggggagggctgtagctccgcctgc
cccacctgtgttcaggggacctgcgatgctgtgactggggaatgtgtctgcaacgctggc
tactgggggcccagctgcaacacttcatgcccatctggcttccatggcaacaactgttct
gttccctgtgaatgcccagagggaccctgcaaccctgtctctggggcctgccagttgggg
cctcacggccaggatgcagccctcatcgcaggcgtcctcgggcctctgctgctgctcctc
ctgggtatcatcctctgcgcctgctgctgctgggccgcccggtcggaccccaaggacagg
ccagcaagggacggagcagctgtgtccagggtgaagctgcaggtctggggggcactgagc
agcctgggctcggcgctcccctgtggttccttcagcagccacaagcttccctgggtgaca
gtctcgcaccacgacccggagatccccttcaaccacagtttcatcgagccgccctcggcg
ggctgggcctcggacgactccttctcttctgatcccgagtctggagaggacgagagccct
gcctactgcgtgccaccccaagaagggatggtcactgtggcccacggagagtttccagag
gccagcgtggctggaggtcccgtccctccccctgaggacgcctccacaccatttcccatc
ccgcgcacttccagccttgcacgggccaagcggccatcggtctcctttgctgaaggcacc
aagtttgcaccacagagtcgccgaagctcaggggagatctccagtcctctccgaaagccc
aagaggctctccaggggggcccagctgggtcctgagagccaggaggctgaggagtccacg
ggctcagagaaagcagaaatggatgagacccttcctggtgctgccagccctagggattca
gccactggccgccgccgacttccccttggtggccggacagtggctgagcgtgtagaagcc
attgagggcagtgtcttggagggctctggctctgtgaccacaatctacatgcttgccggg
acaccccagtcatctgagggccccgtccgctctgttcttcgccgttttggtagcttccag
aaaggccaggcagagcccaaggtcaagagtgccatccctaagcctccacgcagggcccta
agtcgaaataagggcatccctgggctggcctctggctctgccagtcagagccccagctta
tcccccagtgatgaactcactaggcccttggagtctgcaggaactgggccagaggaagtg
gccagggggctagggattggcaccaagagctcagggagggcccaggagctcgcccctgag
ggtggcccccaagaacaggatccccagaagctggctgatgaggaagggcaggaggagccc
cagtatgagaatgttgtacccatctctgggtcaccagcaccctga
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