KEGG   Ailuropoda melanoleuca (giant panda): 100466821
Entry
100466821         CDS       T01329                                 
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X3
  KO
K06757  neurofascin
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100466821 (NFASC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    100466821 (NFASC)
Cell adhesion molecules [BR:aml04515]
 Immunoglobulin superfamily
  L1 family
   100466821 (NFASC)
SSDB
Motif
Pfam: Ig_3 I-set fn3 Ig_2 ig Bravo_FIGEY V-set Ig_DSCAM-DSCAML_C Ig_5 C2-set_2 V-set_CD47 Ig_VEGFR-1-like_5th BiPBP_C DUF4998
Other DBs
NCBI-GeneID: 100466821
NCBI-ProteinID: XP_019654125
Ensembl: ENSAMEG00000001153
LinkDB
Position
8:104094214..104273727
AA seq 1361 aa
MARQQPPPWIHAAVLFCLLSLSGAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNIL
IECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEDYEGEYQCFA
RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
EPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYN
DSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK
GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP
KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSR
AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLR
WFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTR
IFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMKKEDDSLTIFGVA
ERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERS
VRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKFPGSVNSAVLQLSPYVNYQFRVI
AINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRY
IVKWRRRETRETWNNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGED
YPRAAPTDVKIRVLNSTAITLQWNRVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQ
ASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQP
NLETINLEWDHPEHPNGILTGYTLKYVAFNGTKLGKQIVENFSPNQTKFTMQRADPVSRY
RFTLSARTQVGSGEAVTEESPAPPNEATPTAAPPTSPPTTVGATGAVSSTDAPAPAATTE
ATTVPTIPSVAPTTVATTTAATTTTTAATTTTERPPTTTSGTKMPESAPDRQSIWNVTVL
PNSKWANITWKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYS
RDNEGISSTVITFMTSTAYTNSQADIATQGWFIGLMCAIALLVLILLVVCFIKRSRGGKY
PVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGE
GQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq 4086 nt   +upstreamnt  +downstreamnt
atggccaggcagcagccgccgccctggatccacgcagccgtcctgttctgcctcctcagc
ctcagtggggccatcgagattcctatggacccaagcattcagaatgagctatcccagccc
ccaacaatcaccaagcagtcagtgaaggaccacatcgtggatccccgcgataacatcttg
attgagtgtgaagcaaaggggaaccctgcccccagcttccactggactcgaaacagcaag
ttcttcaacattgccaaggacccccgggtgtccatgaggaggcggtctgggaccctggtg
atcgacttccgcagtggggggcggcccgaggactatgagggggagtaccagtgttttgcc
cgcaacaaatttggcacagccctgtccaataggatccgcctgcaggtgtccaagtccccc
ctgtggcccaaggaaaacctagaccccgtcgtggttcaagagggcgctcccctgacgctc
cagtgcaaccccccacctggacttccgtccccagtcatcttctggatgagcagctccatg
gagcccatcacacaagacaagcgcgtctctcagggccataacggcgacctgtatttctct
aacgtgatgctccaggacacgcagacagactacagctgcaacgcgcgtttccacttcacc
cacaccatccagcagaagaacgccttcaccctcaaggtcctcaccaacaacccctataat
gactcgtccttaagaaaccaccctgacatgtacagtgcacgaggagttgcagaaagaacg
cccagcttcatgtacccccagggcacggcaagcagtcagatggtgctgcgcggcatggat
ctcctgctggagtgcatcgcctccggggtcccaacaccagacatcgcgtggtacaagaag
ggtggggacctcccatctgacaaggccaagtttgagaacttcaacaaggctctacgtatc
accaacgtctccgaggaggactctggggagtatttctgcctggcctccaacaagatgggc
agcatccggcatacgatctcggtgagagtaaaggcggctccctactggctagacgaaccc
aagaaccttatcctggctcctggcgaggatgggagactggtgtgtcgagccaatgggaac
cccaagcccactgtccagtggatggtaaatggggaacctctacaatcggcaccacgcaac
ccaaaccgtgaggtggccggggacactatcatcttccgggacacccagatcagcagcagg
gctgtgtaccagtgcaacacctccaacgagcatggctacctgctggccaacgccttcgtc
agcgtactggacgtgccaccccggatgctgtctccccgaaaccagctcattagggtgatc
ctgtacaaccggacacggctggactgcccgttctttgggtcccctatccccacactccga
tggtttaagaacgggcagggaagtaacctggatggtggtaactaccacgtctacgagaac
ggcagtctcgaaatcaagatgatccgcaaagaggaccaaggcatctacacctgtgtcgcc
accaacatcctgggcaaagctgaaaaccaggtccgcctggaggtcaaagaccccaccagg
atcttccggatgcctgaggaccaggtggccaaaaggggcaccacggtgcagctggagtgt
cgggtgaagcacgacccctccctgaagctcacagtcacctggctgaaggatgacgagcct
ctctacatcggaaacaggatgaagaaggaagacgactccctgaccatcttcggggtggcc
gagcgggaccagggcagctacacctgcatcgccagcaccgagctggaccaggacctggcc
aaggcccaccttactgtgctagctgatcaggccactccaactaaccgtttggctgccctg
cccaaaggacggccagaccgaccccgggacctggagctcacggacctggccgagaggagc
gtgaggctgacctggatcccaggggatgataacaacagccccatcacagactacgtcgtc
cagttcgaagaggaccagttccagcccggggtctggcatgaccattccaagttcccaggc
agtgtcaactccgccgtcctccagctgtccccgtatgtcaactaccagttccgcgtcatc
gccatcaacgaggtgggcagcagccaccccagcctcccctccgagcgctaccggaccagc
ggggcaccccccgagtccaatcccgccgacgtgaagggagaaggcaccagaaagaacaac
atggagatcacatggacgcccatgaacgccacctccgcctttggccccaacctgcgctac
attgtcaagtggcggaggagagaaacccgagagacgtggaacaacgtcacagtatggggc
tcccgctacgtggtggggtcgacccccgtctacgtgccctatgagatccgagtccaggcc
gaaaatgacttcgggaagggccctgagcccgacactgtcatcggttactccggggaagat
tatcccagggctgcacccactgacgttaaaatccgagtcctgaacagcacagccatcacc
cttcagtggaaccgcgtctaccccgacacggtgcagggccagctcagagagtaccgagcc
tactactggagggagagcagcttgctgaagagcctgtgggtgtctcagaagaggcagcaa
gccagcttccctggtgaccgcccccgtggcgtggtgtcccgcctcttcccctacagtaac
tacaagctggagatggtcgtggtcaatgggagaggcgatgggcctcgcagtgaaaccaag
gagttcaccaccccggaaggagtacccagtgcccccaggcgtttccgagtccggcagccc
aacctggagacaatcaacctggaatgggatcacccggaacaccccaacgggatcctgact
ggatacactctcaaatacgtggcctttaatggaaccaaattaggaaagcagatagtggaa
aacttctctcccaatcagaccaagttcacgatgcaaagagcagaccccgtgtcgcgctac
cgctttaccctcagtgccaggacgcaggtgggctctggggaagcagtcacagaggagtca
ccagcacccccaaatgaagctactccaaccgcagctcctcccacgtcgcccccgaccacg
gtgggtgcgacgggcgctgtgagcagtactgacgctcctgcccctgctgccaccaccgaa
gccacaacagtccccaccatcccaagtgtcgcacctaccaccgtggccaccaccaccgcc
gccacaactaccaccactgccgccaccaccaccacggagaggcctcccaccaccacctcc
gggactaagatgcccgaatccgcccccgacaggcagtccatatggaacgtcacggtgctc
cccaacagtaaatgggccaacatcacctggaagcacaatttcgggcccggaactgacttt
gtggttgagtacatcgacagcaaccatacgaaaaaaactgtccctgttaaggcccaggcc
cagcctatacagctgacagacctctatcccgggatgacatacacgttgcgcgtttattcc
cgggacaacgagggcatcagcagtaccgtcatcacctttatgaccagtacagcttacacc
aacagccaggccgacatcgccacccagggctggttcattgggctcatgtgcgccatcgcc
ctcttggtgctgatcctgcttgtcgtctgtttcatcaagaggagtcgaggtggcaagtac
ccagtgcgagaaaagaaggatgttcccctgggccccgaggaccccaaagaagaggacggc
tccttcgactacagtgacgaggacaacaagcccctgcagggcagccagacatccctggac
ggcaccatcaagcagcaggagagtgacgacagcctggtggactatggcgaggggggtgag
gggcagttcaacgaggacgggtccttcatcggccagtacacagtcaaaaaggacaaggag
gagacagagggcaatgaaagctcagaggccacgtcgcctgtcaacgccatctattctctg
gcctaa

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