KEGG   Ailuropoda melanoleuca (giant panda): 100466830
Entry
100466830         CDS       T01329                                 
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03013  Nucleocytoplasmic transport
aml05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100466830 (NUP43)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100466830 (NUP43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100466830 (NUP43)
   03036 Chromosome and associated proteins [BR:aml03036]
    100466830 (NUP43)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100466830 (NUP43)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100466830 (NUP43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_EML Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_RIG_2nd WD_LRWD1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st EIF3I Beta-prop_SPT8 Beta-prop_CAF1B_HIR1
Other DBs
NCBI-GeneID: 100466830
NCBI-ProteinID: XP_011224881
Ensembl: ENSAMEG00000018267
UniProt: G1MIX4
LinkDB
Position
10:complement(93797952..93809661)
AA seq 380 aa
MEDIYAKFVSQKISKTRWRPVPPGSLQTADIFAAGSWDNEENYVSLWAIGDFGNLDSDGG
FEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVSQQWTSAHY
HTGPGSPSCSSAPCTGIVCSNPEIVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAVTF
LRTPEILTVNSIGQLKIWDFRKQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDG
MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWHWDASTDVPEKSS
LFNQGGRNSTFLSHSISNQANVHQSLISSWLSTDPAKDRIEITSLLPSRTLSVNSLDVLG
PCLVCGTDSEAIYVTRQLFS
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggaggatatttatgccaagtttgtgtctcagaaaatcagcaaaacccgctggcgaccg
gtacctccggggagcctgcagaccgcggatatcttcgctgcgggctcttgggacaatgag
gaaaattatgtttcactgtgggctattggagattttgggaacttggactctgacggaggg
tttgaaggagaccatcagctattgtgtgatatcagacaccatggcgatgtaatggattta
caattttttgaccaggaaagaattgtagctgcttcttcaacaggatgtgtaacagttttc
cttcaccatccgaataaccagactctgtcagtcagccagcagtggacaagcgctcactac
cacacaggcccaggcagtccttcctgcagcagtgcaccgtgcacaggtattgtgtgcagt
aacccagaaattgtcaccgtcggagaagatggtcggataaatctcttcagggccgatcac
aaggaggcagtgagaaccatagacaatgcagatagcagtacactccatgctgtaaccttc
cttcgaactcctgagattcttacagtaaattcaattgggcagttaaaaatatgggatttc
agaaaacaaggaaatgagccctctcagatattatcactgactggtgatcgagtgcccctc
cactgtgttgatagacatcccaaccagcagcatgttgtagctactggtggccaggatgga
atgctgagtatttgggatgttagacaaggcactatgcctgtgtctctgctgaaggctcat
gaagctgaaatgtgggaagttcactttcacccatccaacccagatcatctatttacttgt
tctgaggatggatccctctggcactgggatgcctccacggacgtacctgaaaaatcatca
ctgtttaaccaaggaggaagaaatagtacttttttgtctcacagcattagtaaccaggct
aatgttcaccagtctcttataagctcctggctcagcactgatcctgcaaaagaccgtatt
gaaatcacaagcttgcttcccagcaggactttgtctgtgaacagtttggatgttttaggt
ccttgtcttgtttgtggaactgattcagaagccatttatgttactagacaacttttctca
tga

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