Ailuropoda melanoleuca (giant panda): 100467135 Help Entry 100467135         CDS       T01329                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism aml  Ailuropoda melanoleuca (giant panda) Pathway aml03082   ATP-dependent chromatin remodeling aml04714   Thermogenesis aml05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:aml00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     100467135 (SMARCC1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     100467135 (SMARCC1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     100467135 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aml03021]     100467135 (SMARCC1)    03036 Chromosome and associated proteins [BR:aml03036]     100467135 (SMARCC1) Transcription machinery [BR:aml03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      100467135 (SMARCC1) Chromosome and associated proteins [BR:aml03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     100467135 (SMARCC1)    PBAF complex     100467135 (SMARCC1)    GBAF(ncBAF) complex     100467135 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 BRCT_2 Chromo DUF919 Motif Other DBs NCBI-GeneID:  100467135 NCBI-ProteinID:  XP_034513098 Ensembl:  ENSAMEG00000013014 LinkDB All DBs Position 4:complement(16567855..16740451) Genome browser AA seq 1221 aa AA seqDB search MGRKIFPFRRCQRMTQNLRAVVDGMQELGYSTTRRRPGRALEKVRSLTRLAEEAGASACP KPARRRCCACVRACPLRLGNESREREGPALRAGRGLAGRGREAVVAAARARAGANGDHRE GRGGPGGGDDGRRRWPRPAVAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLGKHYK KYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGA AYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKLANKL KDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTWV HSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKN EEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQ EDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGGKEDE DPSKGDQSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTP EIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESR PMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTD IYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRL PIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSR VREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETD TDGQQPEKAENKGENETDEGEKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDS CKERESDLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQM KKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHG QNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMI PGQPMPGRMIPTVAANIHPPGSGPAPPGMPPMPGNILGPRVPLTAPNGMYAPPPQPPPPP PPPTDGAPPPPAPGPPASAAP NT seq 3666 nt NT seq  +upstreamnt  +downstreamnt atggggcggaagatctttcctttccggcggtgtcagcggatgacacagaacctccgtgca gtggttgacgggatgcaggaacttggatacagcacaacccgcagacgcccaggtcgggcc ctggagaaggtgcgcagccttactcggctggcggaagaggcgggggcaagtgcttgtccc aagcccgcccggcgccggtgctgcgcatgcgtgcgcgcgtgccctcttcggttagggaac gagtcccgagaaagggaggggccagccctccgcgccggaagggggttggctgggcggggc cgggaggcggtggtagcggctgcgcgcgcgcgcgcgggtgcgaacggggatcaccgcgag ggccggggcgggccgggcggtggggacgacggacggcgacgatggccgcggccggcggtg gccgcgggcctggccgtttatcggcggaaggacggtggcccggccagcaagttttgggag agcccggagacggtgtcccagctggactcggtgcgggtctggctggggaagcactacaag aagtacgttcatgcggatgctcctaccaacaaaacgctggctgggctggtggtccagctt cttcagttccaggaagatgcctttgggaagcacgtcaccaacccggccttcaccaaactc ccggcaaaatgtttcatggatttcaaagctggagggaccttgtgtcacattcttggggct gcttacaagtataaaaatgaacagggatggcgtaggtttgatttacagaatccatcccga atggatcggaatgttgaaatgtttatgaacattgaaaaaacattggtgcagagcaattgt ctgaccagacccaacatctacctcattccagacattgatctgaagttggctaacaaattg aaagatattatcaaacgacatcaggggactttcactgatgagaagtcaaaagcttcccac cacatttatccatatccttcctcacaagaggatgaagaatggttgagaccggtgatgaga aaagataagcaggtgttagtgcattgggggttttacccagacagctatgacacttgggtc catagtaatgatgttgatgcggaaattgaagatccaccaattccagaaaagccatggaag gttcatgcaaaatggattttggacactgatgttttcaatgaatggatgaatgaggaggat tatgaggtggacgagaacaggaagcctgtgagctttcgtcagcggatttcaacaaagaat gaagagccagtcagaagtccagagagaagagataggaaagcatcagctaatgctcgaaag aggaaacattcgccttcccctccgcctcctacacccacagaatcacggaagaagagtgga aagaaaggccaagctagtctttatgggaaacgcagaagtcagaaagaggaagatgagcaa gaagatcttaccaaggacatggaagacccaacaccggtacccaacatagaggaagtggtg cttccaaaaaatgtgaacccaaagaaagacagtgaaaacacacccgttaaaggaggaact gtcgcagatctagatgaacaggatgaagaaacagtcacaacaggaggaaaggaagatgaa gatcctagcaaaggtgatcagagtcgctcacttgaccctggagaagataatgtgacagag cagaccaatcacattattattcctagttatgcatcatggtttgattataactgtattcac gtgattgaacggcgcgctcttcctgagttcttcaatggaaaaaacaaatccaagactcca gaaatatacttggcatatcgaaattttatgattgacacatatcgcctaaacccccaagag tatttaaccagcactgcttgtcggaggaacttgaccggagacgtgtgtgctgtgatgagg gttcatgcctttttggagcagtggggacttgttaattaccaagtggatccagaaagtcga cccatggcaatgggacctcctcctactcctcattttaatgtattagctgataccccctct gggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcagcagatgttaaat tttcctgagaagaacaaggaaaaaccaattgacttgcagaactttggtcttcgaactgac atttactccaagaaaaccttagcaaagagtaaaggtgctagtgctggaagagaatggact gaacaggagacccttctgctcctggaggccctggagatgtacaaggatgattggaacaaa gtatctgagcatgttggcagtcgtacccaggatgaatgcatcctccactttctgaggctt cctattgaggatccataccttgagaattcggatgcttccctgggccccttggcctaccag cctgtccctttcagtcagtcaggaaacccagtcatgagcactgttgcttttttggcatct gtggtggatcctcgtgtggcatctgccgcggcaaaagcagctttggaggagttttctcgg gtccgagaggaggtaccactggaattggtcgaagctcacgtcaagaaagtacaagaagca gcacgagcctctgggaaagtagatcccacctatggcctggagagcagctgcattgcaggc acgggacctgatgagccagagaaacttgaaggggctgaagaggaaaaaatggaaacagat actgatggtcagcagcctgaaaaggcagaaaacaaaggggaaaatgaaacagacgaaggt gagaaagcacaagacggagaaaatgaaaaaaatagtgagaaggagcaggacagtgaagtt agtgaggataccaaatcagaagaaaaggaaactgaagagaacaaggaactcactgattct tgtaaagaaagagaaagtgatctcgggaagaagaaagtagaacacgaaatttccgaagga aatgtggccacggccgcagcagctgctctcgcctcagctgcaaccaaagccaagcacctg gctgccgtggaagagagaaagatcaagtctctggtggccctgctggttgagacacaaatg aagaaactggagatcaaacttcgacattttgaggagctggaaactatcatggacagagag aaggaggctttagaacaacagaggcagcagttgcttacggaacgccagaacttccacatg gaacagctgaaatatgccgaattgcgagcccgacagcaaatggaacagcagcagcatggg caaaacccgcagcaggcacaccagcactccggaggacctggcctggcgccacttggagca gcagggcaccccggcatgatgcctcatcagcagccccctccctaccccctgatgcaccac cagatgccaccacctcatccaccccagccaggtcagataccaggtccaggttccatgatc cctgggcagcccatgccaggccgcatgattcccaccgttgcagccaacatccacccccct gggagtggcccagcccctcctggtatgcctccaatgccaggaaacatcttaggaccccgg gttcccctcacggcacctaatggcatgtatgcccctccaccgcagccgccgccgccgcct ccgccacccacagatggagcccctccgcctcctgctccaggcccgccagcctcggccgcc ccctag

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