Ailuropoda melanoleuca (giant panda): 100467324
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Entry
100467324 CDS
T01329
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X4
KO
K24885
homeobox-containing protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100467324 (HMBOX1)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100467324 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
CUT
HTH_24
HTH_31
HTH_37
HTH_26
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
100467324
NCBI-ProteinID:
XP_011222817
Ensembl:
ENSAMEG00000016028
UniProt:
A0A7N5JJ17
LinkDB
All DBs
Position
5:80031794..80217073
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AA seq
420 aa
AA seq
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MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDK
FGRRSNYGGSSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
NNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRP
APIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcttagttcctttccagtggttttgctggaaaccatgtctcactatacagatgaaccc
agatttaccatagagcagatagatctgcttcagcgccttcggcgtactggaatgactaaa
catgaaattctccatgccttggaaactttggaccgtcttgaccaagagcatagtgacaag
tttggaagaaggtccaactatggaggaagttcttatgggaatagtaccaacaatgttcca
gcatcttcctctacagctacagcttccacacagacccagcattctggaatgtccccatct
cctagcaacagttatgatacctccccacaaccttgcactaccaatcaaaatgggagggag
aataacgagcgattatccacgtccaatggaaagatgtcacccactcgctaccatgcaaac
agcatgggtcagaggtcttacagttttgaagcctcagaagaggacctagatgtagatgat
aaagtggaggaattaatgaggagggacagcagtgtgataaaagaggaaatcaaagccttt
cttgccaatcggaggatttcccaagcagttgttgcacaggtaacaggtatcagtcagagc
cggatctctcactggctgttgcagcagggatcagacctaagtgaacagaagaaaagagca
ttttaccgatggtatcaacttgagaagacaaaccctggggctacactaagtatgagacca
gcccccattccaatagaggacccagagtggagacaaacacctcccccagtctctgccaca
tctggcaccttccgactacgacgagggagtcgatttacctggagaaaggagtgcctggct
gtcatggaaagttacttcaatgagaatcaatacccagatgaagctaagagagaagaaatt
gccaatgcttgcaatgcagttatacagaagccaggcaaaaaactgtctgatctggaacga
gttacctccctgaaagtatataattggtttgctaacagacggaaggagatcaagaggaga
gccaatattgaagcagcaatcctggagagtcatgggatagatgtacagagtccaggaggc
cattccaacagtgatgatgttgacggaaatgactactcagagcaggatgacagcactagc
catagtgaccaccaagaccccatctcattagctgtggaaatggcagcagtcaaccatact
atcttggcattggcccgacaaggagccaacgaaatcaagacagaggccctggatgacgac
tga
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