Ailuropoda melanoleuca (giant panda): 100467356
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Entry
100467356 CDS
T01329
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03030
DNA replication
aml03410
Base excision repair
aml03420
Nucleotide excision repair
aml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100467356 (RFC1)
03410 Base excision repair
100467356 (RFC1)
03420 Nucleotide excision repair
100467356 (RFC1)
03430 Mismatch repair
100467356 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aml03032
]
100467356 (RFC1)
03400 DNA repair and recombination proteins [BR:
aml03400
]
100467356 (RFC1)
DNA replication proteins [BR:
aml03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100467356 (RFC1)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100467356 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
Rad17
RuvB_N
AAA_30
AAA_14
AAA_17
AAA_5
AAA_33
AAA_16
AAA_18
RNA_helicase
nSTAND3
AAA_7
Zeta_toxin
AAA_19
NTPase_1
SKI
NPHP3_N
TIP49
Motif
Other DBs
NCBI-GeneID:
100467356
NCBI-ProteinID:
XP_011230545
Ensembl:
ENSAMEG00000003216
LinkDB
All DBs
Position
11:78770577..78857419
Genome browser
AA seq
1153 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVTETIKKNEKTKSAEETLKAKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQIKNAKKQPEKLPLSSKPGKILRQDPVTYISETDEEDDFMCKK
AASKSKENGGSTNSFLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
ARKDPGEREAFSPVQANLSKAEKHKSPHKVKTEQFSDDRKNCSPKKQTKCESLIGSQQHL
KSSPHKIGETSPKASSKVALLKKKGESSYKETEPMVSKRKENAVELKGQTKTPKKPKSSP
AKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRT
MPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESGSKKSRLTPKKDSSIK
SVKKETSVLWRCLDFKEEVAEGTNGDSRARSLADDSPENKVEDLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLRNWHKGPLEDQKRAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSITGFYSTSQHGADGAAHVSTKH
ALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRP
RVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKA
DSHRAKKDIKLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPV
AAGGDMKKHLMLLSRAADSICDGDLVDRQIRSRQNWSLLPTQAIYASVLPGELMRGYMTQ
FPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGV
EGVQDVIALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRTYNKEVHLTPY
SLQAVKTPRHSTGPALDSEYSEELNEDDSQSDEKDQDSMETDAMIKKKTKSSKPSKSEKD
KESRKGKGKSSKK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacccgtaactgaaaca
ataaagaagaatgagaaaacaaagtccgctgaagaaactttaaaagcaaaaaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcagataaaa
aatgccaaaaagcaaccagaaaaattgccattgtcttctaaacctggtaaaattctgcgc
caggatcctgttacatacatttcagaaacagatgaagaagatgactttatgtgtaagaag
gcagcctctaaatcaaaagagaatggaggatctacaaatagttttcttggagcatcaaac
atgaaaaagaacgaagaaaacactaagaccaagaataaacctttatcaccaataaaactt
acccccacgtcagtgcttgactattttggaactggaagtgtccaaagatcagataagaag
atggtagcgagcaaaagaaaagagccttcacaaaatgcagacgattccagattaaatgat
gaagccatcgccaagcagttgcaacttgatgaggatgcagagctggagagacaactgcat
gaagatgaagagtttgccagaacattagccatgttggatgaagaacccaagaccaaaaag
gctcggaaggacccaggagagagagaagcattttcacctgtccaagccaatttaagtaaa
gcagaaaaacataaatctcctcataaagtaaaaacagaacaattttcagatgacagaaag
aactgcagccccaagaagcaaactaaatgtgaaagtttgataggatctcagcaacatttg
aagtcatcccctcacaaaataggagaaacttctccaaaagccagttccaaggtggccctt
ttgaaaaaaaagggagagagttcttataaagaaacagagcctatggtttcaaaaagaaaa
gaaaatgctgttgaattaaaaggacagacaaaaactcctaagaaacccaaaagttctcca
gctaaaaaagagtctgtaagtcctgaagattctgagaagaggcgcaccaattatcaagct
tatcgaagctacttaaatcgagaaggccccaaagctctgggctccaaagaaataccaaag
ggagctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatt
gaacgagatgaggccaagtctctaattgagcgttacgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataag
gcagcagccttggggacaaatattattgatgaagatggcctgttgaacctgattcgaact
atgccaggcaagaagtctaagtatgaaatagccgttgaagccgagatgaagaaagaaaag
tccaaattggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaact
aagaaggaatcaggatctaaaaaaagcagactgactcccaaaaaggacagctctataaag
tcagtaaaaaaggaaacaagtgtgctttggagatgcctggacttcaaggaggaggtggcc
gaggggacaaatggtgacagccgggctaggagtttggctgatgacagccctgaaaacaaa
gtggaagatttgctctgggtggataaatataagccaacctcgctcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctgcgctggctccggaactggcacaag
ggtccgttggaagatcagaaacgcgcagcaaagtttggtaagtttgctggcaaagatgat
ggctctagttttaaagcagcgctgctctcaggccctccaggtgttggcaagacaaccaca
gcttctctggtttgtcaggaattgggatatagctatgtggaactgaatgcaagtgacact
cggagtaagaacagtttgaaggagattgttgctgaatcactgaataataccagcatcaca
ggcttttattcaacttcgcagcatggggcagacggagcagcccatgtaagcacgaagcat
gctctcatcatggatgaagtagatggcatggcaggcaatgaggacaggggaggaattcag
gaattaattggtctgataaaacatacaaaaattcccattatttgtatgtgcaatgataga
aatcatcccaagattcgctctttggttcattattgttttgatcttcgttttcaaagacca
cgagttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttgaagatc
ccccctccagctatgaatgaaataattttgggagccaatcaagatatcagacaggtttta
cacaatctgagtatgtggtgtgcacgaagtaaggcactaacctatgaccaggccaaggct
gattctcatagagccaagaaagatatcaaactgggcccatttgacgttgcccggaaagtg
tttgcggctggagaggagaccgctcatatgtcacttgtggacaagtcagatctcttcttt
catgattattcgatagcacccctctttgtccaggagaactacatacatgtgaaacctgta
gctgcagggggtgacatgaaaaagcacttgatgcttttaagcagagcagcagatagcata
tgtgatggtgacctggtggaccgtcagatccggagtaggcagaactggagtcttctgccc
acacaggccatttatgccagtgttcttcctggagagttaatgagggggtacatgacccag
tttcctacgtttccaagctggttggggaagcactcatctaccggaaaacatgatcgtatt
gtacaggacctcgcactgcacatgagtctcagaacttattccagcaaaaggactgtaaac
atggattatctgtcacatataagggatgcacttgtacagcccttgacctcacaaggggta
gaaggagtacaggatgttattgctctgatggacacctactacttgatgaaagaagacttc
gagaatatcatggaaattagcagctggggaggcaaacctagtcccttctccaagctggac
cccaaggtgaaagcagccttcacaagaacttacaataaggaagtccaccttactccatat
tcacttcaggcggtgaagacacccagacacagcacaggcccagcactggattctgaatac
agtgaagagttaaatgaagacgactctcaatctgatgagaaagaccaggattctatggaa
actgatgcaatgatcaagaaaaagacaaaatcttcaaagccttcaaaatcagaaaaagat
aaggagtccagaaaaggaaaaggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
