Ailuropoda melanoleuca (giant panda): 100467502
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Entry
100467502 CDS
T01329
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100467502 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100467502 (JMJD1C)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100467502 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
100467502
NCBI-ProteinID:
XP_011228562
Ensembl:
ENSAMEG00000009563
LinkDB
All DBs
Position
6:complement(68037645..68310293)
Genome browser
AA seq
2544 aa
AA seq
DB search
MAVETRLELVGKRFLCVAVGEEARPERRESGRCWRGWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWARRIDPSQTQGSKSKQIQWPALTFKPLIEKS
IPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWVKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGITSRRRSRASQNSNAVHGHYTRAQANSPRPAMNSQAAVPKQNT
HQQQQQRNIRPSKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKNKQLVNKRRKPEEDEK
KLNMKRLRTDNVSDFSESSDSENSNKRMINNSSEQKPENELKNKNTSKINGEEGKSQNNE
KVGEETLIIDSQPPWDQIQEDKKNEEAEKQKSVDSQLQEKMIIHSSEQATLSDHNPNDLL
LQECNMEKTHTVELLPKEKFVSRPPTPKCVIDITNDTNSEKVAQENTSTFGLQTLQKMDP
NVSDSKHSIANAKFLETAKQDSDQSWVSDVVKVDLTQSNVRSASSGTDHLNMEKEKSQYV
SYISSLSAVSVTEDKLHKRSPPPETVKSKLNTSVDAHKTKSNPSPEVIKPKITHSPDSVK
SKSTYVNNQAAGERRLANKIEHELSRCGFHSVPTRGSTLEATKSPLIIDKNEHFTVYRDP
ALVGSETGANHISPFLNQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTI
NTHPLSSGPHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLL
QHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAESSLR
RNSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRSLKITAHSSPPLTKSLIDHHKEE
LERKAFIEPLRSVASTSAKNDLDLNRSQTGKDGLLHRHFVDPVLNQLQRQPQETGERLHK
YKEEHRRILQESIDVAPFTTKIKGLEGERDNYSRVPLSSSSPKSHVIIKQDKDVECSVSD
LYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQNNSVAATANPQTLT
SFISSLSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTTFRNDCRSPTHLTVSSTNAL
RSMPALHRAPVFHPPIHHSLERKESNYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEP
KDSQANFKSSSEQSLSEIWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSSTKLEN
VPAMQLASKDRVSERSSTGANQTDCLKPAEAGETGRIILPSVNSDSAHIKSEKNVQAVSQ
GSVPSSVMSAVNTMCNTKMDVFTSAATTTSVSSWGGSEIIYSLSNTILASKSLECTSSKS
VSHSVAQIQECRVSTTAPVTPASSQTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKSS
NVSETEPNAVKNQTSSTSPLLDSTVVCSTINKANSVGNGQASQTSQPNYHTKLKKAWLTR
HSEEDKNTNKMENSGNSVSEIIKPCSVNLIASTSNDIQNSVDSKIIVDKYVKDDKVSRRK
AKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRS
AKEKSKLKLQSNSNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRL
IRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYDDDE
LDVETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNI
HWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDL
LDVMHTLREKYGIKSHCHCTNKQNIQVGNFPAMNGVSQVLQNVLNHSNKISLCMPESQEQ
NNPQKSESNGNSSPGSDVSTDSKLTPPESQSPLHWLADLAEQKSREEKKENKEFALEKQI
KEEREQDNPDSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGT
PSGKSGRTMPNILDDIIASVVENKIPPNKASKINVKPELKEEPKESKKSPMEENNKLYSD
IPHSWICEQHILWLKDYKNTNNWKLFRECWKHGQPAVVSGVHKKMNISLWKAESISLDFG
DHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMPT
RYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLH
VEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAG
KDIDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLFEEYGVRTCTLIQFLGD
AIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNIL
YHAVKEMVRALKIHEDEVEDMEEN
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcgtctggaactggtgggcaagcggttcctgtgcgtggcggtcggc
gaggaggctcggcccgagcgccgagagagtggacgctgctggcggggctggcgagcgggg
gtcatccgagctgtgtcacacagggacagccgcaatccggacctggcggtgtatgtggaa
tttgatgatcttgaatgggataaacgagagtgggttaaagtatatgaagatttttcaact
ttcttggtggaataccacttaatctgggccagaaggatcgaccctagccagactcaggga
tcaaagagcaaacaaattcagtggcctgcattgactttcaaacccctgattgaaaaaagt
atacccagttcaatcactgcggtagaattccttgtagataaacaactggattttttaact
gaagatagtgcctttcaaccctaccaggacgacatagacagcctaaacccagttctcagg
gacaacccgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaggttcaggag
atttttatgcaaggtccttattccttaaatggatacagagtgagagtatatagacaagac
tctgccacccagtggtttactggcataattactcatcatgatctcttcactcgcaccatg
atcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatg
acctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatca
cggcgaaggtctcgtgccagtcaaaatagcaacgctgttcacggtcattatacacgtgcc
caagcaaatagtcccagaccagcaatgaactcccaagctgctgtaccaaaacagaataca
caccagcaacagcaacaaagaaatattcgtccaagtaagaggaagggctcagatagcagt
ataccagatgaagagaagatgaaggaggaaaagtatgattatatagcacgaggagaaaat
cctaaagggaaaaacaaacaattggtgaataaaagaaggaaacctgaggaggatgaaaag
aaactaaatatgaaaagactacggactgacaacgtttcagacttttctgagagcagtgac
tcagaaaattcaaataaaagaatgataaataattcctcagagcagaagccagagaatgag
ttgaaaaataaaaacacttcaaagataaatggagaagaaggaaaatcccagaataacgag
aaggtaggagaagagacactaataatagatagccagcctccatgggatcaaatacaggaa
gataaaaaaaatgaagaagcagagaagcagaagtctgttgactctcagcttcaagaaaaa
atgattattcattcatcagagcaggccacactttctgatcataatcctaatgatttactt
cttcaggaatgcaatatggaaaaaacacatacagtggaattattaccaaaggagaagttt
gtatccagaccacccacaccaaaatgtgttattgatattacaaatgacactaattcagaa
aaggtggctcaggaaaacacaagtacctttggccttcagacacttcagaaaatggatcct
aatgttagtgattcaaaacattctattgcaaatgcaaaattcttggaaacagcaaaacaa
gattctgatcagagctgggtcagtgatgtagttaaagtagatttaacccaatcaaatgtt
agaagtgcttcctcaggaaccgatcacctgaacatggaaaaggagaaaagtcagtatgtc
tcttacatatcttctctaagtgcagtttctgtcacggaagataagctgcataagcgaagc
ccacccccagagacagtaaaatctaaacttaatacttcagtagatgctcacaagacaaaa
tcaaatccctcacctgaagttattaaacccaaaattacccattctcctgattctgtaaag
tctaagtccacttatgtgaacaaccaagctgctggtgagagaagactagcaaataagata
gaacatgagttatcaagatgtggttttcattcagttcctacgcgaggcagtacattggaa
gctacaaagagcccacttatcattgataaaaatgagcatttcacagtttacagagatcct
gcacttgttgggtcagaaacaggagctaatcacatttcacctttcttaaaccagcatccc
tttcctcttcattcttcatcccatagaacctgtttaaatccaggtacccatcaccctgcc
ttaactcctgcaccccacttacttgctgggtcatccagtcaaactccattacctaccatt
aacacacaccctctgagtagtggtccacaccattctgttcatcaccctcatttacttcct
gccgtgttacctggagtgcctactgcctccctacttggtggccacccacgactagagact
gctcatgccagcagcttaagccacttagcattagcacaccagcaacagcaacagttgtta
cagcaccagtcacctcatcttctcggacaagcccatccttctgcttcatataatcagctt
ggactctatccaattatttggcaatatcccaatggaacacatgcatactcaggacttggt
ctaccttcttcaaagtgggttcacccagaaaatgcagttaatgctgaatcttcattaagg
aggaattctcccagtccttggttacatcagcccacccctgtgacctcagcagatggtatt
ggattacttagtcacattcctgtcagaccttccagtgcagagcctcatcggtctcttaaa
attacagcacattccagtccaccattgacaaaaagtttaatagatcaccataaagaagaa
ttggaaaggaaagcttttattgaaccattacgttctgttgcatccacatcagcaaaaaat
gacctggatctaaacaggtcacagactggaaaagatggtctattgcatagacattttgtg
gatcctgtactgaatcaattacagagacaaccccaggagactggagagagattacacaaa
tacaaggaggaacaccgtcgaatcctgcaagaaagtattgatgtcgctccctttacaact
aaaatcaaggggcttgagggtgagagggataattattccagagtaccattgtcatcttct
agccctaaaagccatgtcattatcaaacaagacaaagatgtagaatgctcagtatcagat
ctttataaaatgaagcactcggtgcctcagagtttgccccaaagtaactatttcactaca
ttgtctaatagtgtggtcaacgaaccaccaaggtcatatccatccaaagaggtttcaaat
atttacactgaaaaacagaataattctgttgcagcaacagctaatcctcaaactctgact
tcatttatatcatctctttcaaagcctccacctttaattaaacaccagccagaaagtgaa
ggtttagtaggcaagataccagaacatcttccccatcaaattgcttctcactcagtaaca
accttcagaaatgattgtaggagtcctacccatttgacagtttcttctacaaatgcactc
cggagcatgcctgctttacatagagcaccagtgtttcatccaccaatccatcacagtctg
gaaagaaaggaaagcaactatagtagtctttcccctccaactttaaccccggtcatgcct
gtaaatgctggtgggaaagttcaagaatcacaaaagcctccaactctaattccagagcca
aaagactctcaggcaaattttaagagttcttctgaacaaagtttgtcagaaatatggaaa
tctaataataacctcagcaaagagaaagctgaatggcatgtggagaaaagcagtggaaag
tcacaggctgctatggcatctgtcattgtacgtccaccatctagtacaaaacttgagaac
gtgccagcaatgcagttagcttccaaagatcgagttagtgaaagatcttcgactggggca
aatcaaacagattgcctcaaaccagcagaagctggagagactggaagaatcattctgcca
agtgtgaattcagacagtgctcacataaaatctgaaaaaaatgtccaggctgtctcacaa
ggcagtgttcccagttcagtcatgtctgctgtaaatacaatgtgtaataccaaaatggat
gtattcacatctgctgccactaccactagtgtttccagctggggtggttcagaaataatt
tactctttatcaaataccattttggcctctaaatccttagaatgtacctcttcaaaaagc
gtcagtcattcagtggctcaaatacaagaatgcagggtcagcacgacagctccagttaca
ccagccagtagtcagacaggaagtgctgttcagcccagctctgggttctcaggcacaact
gattttatccatttaaaaaagcacaaggcagcattggctgcagctcagtataaaagtagt
aatgtcagtgagactgagcctaatgctgtgaaaaatcagacatcttcaacctcccctctc
ttggatagcactgtagtctgtagtacaataaacaaagcaaactctgtaggaaatgggcaa
gcatcccagacaagtcaacctaactaccatactaagctgaaaaaggcctggcttactaga
cactcagaggaagataaaaatactaataaaatggaaaattcagggaattctgtatcagaa
attattaagccgtgttctgtcaatttaatagcctctacatctaatgatatacaaaatagt
gtagatagtaagatcatagttgataaatacgtaaaagatgataaagtcagtaggagaaaa
gccaaaagaacttacgaatctggctccgaaagtggagactcagatgaaagtgaaagcaag
tcagagcaaaggactaagaggcagcctaagccaacttacaaaaagaagcaaaatgatttg
cagaagagaaaaggtgaaatagaagaagatttaaaacccaatggggttctcagcaggagt
gccaaagaaaaaagtaaattgaaattgcagagcaacagtaatagtgctggcatccctcgt
tcagtattaaaagattggcgtaaagtcaagaaactgaagcaaactggggaatccttttta
caggatgactcctgctgtgaaatagggcctaatttgcaaaagtgccgggaatgtagactt
attcggagtaaaaaaggagaagaaccaactcattcaccagtgttttgtagattttactac
tttagacgattgtcatttagtaaaaatggagtggttagaatagatggtttttcttctcct
gaccaatatgatgatgaagctatgagcttatggacacatgaaaattacgatgatgatgaa
ctagatgtagaaacttcaaaatacatcttggatatcataggggataagttctgtcagtta
gtaacatcggaaaaaacagctttgtcctgggtgaaaaaggatgccaaaattgcctggaaa
agagcagtgagaggagtccgggaaatgtgtgatgcatgtgaagcaacattgtttaacatt
cattgggtctgccaaaaatgtggatttgtggtctgcttagattgttataaggcaaaggaa
aggaagagttctagagataaagaactgtatgcttggatgaagtgtgtgaagggacagcct
catgatcacaaacatttaatgccaactcaaattatacctggttctgttttgacagatctt
ctagatgtgatgcacactcttagagaaaaatacggtattaaatcccattgtcattgcact
aacaaacagaatatacaagttggaaattttcctgcaatgaatggtgtatctcaagtttta
cagaatgttcttaatcacagtaataaaatttctctgtgcatgcctgagtctcaggagcaa
aataaccctcagaagtctgagagtaatggcaacagcagcccagggagtgacgtaagcaca
gacagcaagttaactcctccagaatcccagtcaccactgcactggttagcagatcttgca
gagcaaaagtccagagaggaaaaaaaagaaaacaaagaatttgcccttgaaaagcaaatt
aaagaagagagagaacaagacaaccctgattctccaaatagcagaacatcacctcctgtg
tcccagaataatgaacagggctcaactttacgagatttgctgaccacgactgctggcaag
ctacgtgtgggttctacagatgctggcattgcctttgcccccgtgtattcaatgggaact
ccaagtggtaaaagtggaaggactatgccaaacattcttgatgacataattgcttcagtt
gttgaaaacaaaattccaccaaataaagcctctaagataaatgtaaaaccagagctgaaa
gaagagcctaaagagagcaaaaaatcacccatggaggaaaacaataaattgtacagtgat
ataccacattcttggatctgtgagcagcatattctgtggcttaaggattataaaaatact
aataattggaagcttttcagagagtgttggaaacatggacaacctgcagtggtttctggt
gtgcataagaaaatgaacattagcttgtggaaggcggaatcaattagtcttgattttgga
gaccaccaagctgatctcctgaactgcaaagacagcattatttcaaatgccaatgttaag
gaattctgggatggttttgaagaagtttcaaaacgacaaaaaacgaaaagtggagaaaca
gttgttttaaaattgaaagattgcccttcaggagaagacttcaagactatgatgccaaca
agatacgaagatcttttaaaaagcctaccattgccagaatattgtaatccagaaggaaaa
ttcaacttggcctctcatttgccaggattttttgtacgccctgatctaggacccaggttg
tgcagtgcctatggtgtagccgctgctaaagatcatgacataggaacaacaaatcttcac
gtggaagtttctgacgtcgtaaatattctagtctatgttggcatagcaaaaggaaatggc
attctctcaaaagcaggaatactcaagaaatttgaggaagaagatttggatgacatttta
agaaaacgattgaaggactcaagtgaaatacctggtgctctgtggcatatttatgcaggg
aaagacattgacaagataagggaatttcttcaaaagatttcaaaagaacaaggccttgaa
gttctaccagaacatgatccgatacgtgaccaaagttggtatgtgaacaaaaagctccgc
caaagactatttgaggaatatggagtcagaacctgtactctcattcagttccttggtgat
gccattgtgttaccagcaggagcacttcatcaggtacagaattttcacagctgtattcag
gtaactgaagactttgtgtccccagaacatcttgtacagtcatttcatttaacacaggaa
ctgagacttttgaaggaggaaatcaattatgatgataaactacaggttaaaaatatactg
tatcatgcggtcaaggaaatggtgagagctttgaagatacatgaagatgaagtagaggat
atggaagaaaattag
DBGET
integrated database retrieval system
