Ailuropoda melanoleuca (giant panda): 100467505
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Entry
100467505 CDS
T01329
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100467505 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100467505 (MYO5C)
04131 Membrane trafficking [BR:
aml04131
]
100467505 (MYO5C)
03029 Mitochondrial biogenesis [BR:
aml03029
]
100467505 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aml04812
]
100467505 (MYO5C)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100467505 (MYO5C)
mRNA cycle factors
P-body specific factors
100467505 (MYO5C)
Membrane trafficking [BR:
aml04131
]
Others
Actin-binding proteins
Myosins
100467505 (MYO5C)
Mitochondrial biogenesis [BR:
aml03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100467505 (MYO5C)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100467505 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
100467505
NCBI-ProteinID:
XP_011228884
Ensembl:
ENSAMEG00000007207
UniProt:
G1LKY6
LinkDB
All DBs
Position
5:54019501..54117329
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAALYTQYNRVWIPDPEEVWKSAEIAKDYRVGDKVLRLLLEDGTELDYSIDPECLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLLIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNTHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTVIEGVNDR
ADMVETRKTFTLLGFKEDFQMDVFKILAAILHLGNVQITAVGHERSTVSEDDRHLKVFCE
LLGLESRKVAQWLCNRKIITTSETVVKPMTRPQAVNARDALAKKIYAHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNRNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEIMRASKFHLCANFFQENPVPPSPF
SSAITVKSAKPVIKPNNKQFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTKQELSFSDKKEVCKVV
LQRLIQDSNQYEFGKTKIFFRAGQVAYLEKLRLDKLRQSCVVIQKHIRGWLQRKKFLRER
QAALTIQQYFRGQQTVRKAVTATALKEAWAAIIIQKYCRGYLVRNLYQLIRVATITIQAY
TRGLLARRRYRKMLEEHKATILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRAGDMEKIQKLESELDRAAAHRHNYEEKGRKYKAAIEEKLAK
LQKHNSELEIQKEQAELQLQEKTEELKEKMDDLTKQLFDDVQKEEQQRILLEKSFELKTQ
DYEKQIWSLKEDLQALRDEKMHLQHQLEEERVTSDGLQGEVAQLRKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEDVRSRLSLEDLEHLNEDGELWFA
YEGLKKATHVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREETDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQTESMKGKLEELSDQLNRNREEEGTQ
RKTIEAQNEIHTKEKEKLISKIQEMQEASEHLKKQFETESEVKSTFRQEASRLTMENRDL
EEELDMKDRVIKKLQDQVKTLTKTIKKGDDVHLSSGPKEYLGMLEYKTEDEDKLIQNLIL
DLKPRGVVVNMIPGLPAHLLFMCVRYADSLNDASMVKSLMNSTINGIKQVVKEHVDDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKLNGPHQNKNCLNNFDLSEYRQILSDVAIRIYHRF
IVVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYS
TMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYECCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgcgctgtacacgcagtacaacagggtatggattcccgatcctgaagaa
gtttggaagtctgctgaaatagccaaagactacagagttggtgacaaagtcctgcgactc
ttgctggaggatggaacggagctggattattccattgatccagaatgtctgcctccgctc
cggaaccctgacatactcgtgggtgagaacgacctcacggccctcagctatctccatgag
cccgcggtcctccacaatctcagaatccgctttgcagaatccaaactcatttacacctac
agtggaatcattttggtggccatgaatccttacaagcagttgctgatctacggagatgcc
atcatccacgcctacagtgggcagaacatgggcgatatggacccgcatatatttgctgtg
gcagaagaggcctacaagcagatggccagaaacaataaaaatcagtcaatcattgtaagc
ggggagtcaggtgctggcaagaccgtgtccgctcgctacgccatgaggtactttgccacc
gttagcaagtccagcagtaacacccacgtggaggacaaggttctggcgtcgaaccccata
actgaggctatcggaaatgccaagaccacccgcaatgacaacagtagtcggtttgggaaa
tacacagaaatcagttttgatgagagaaatcaaattataggagccaacatgagaacttac
ctgctggagaaatccagagtcgtctttcaatcggaaaatgaacgaaattaccacattttt
tatcagctttgtgcatctgcccagcagtcggaatttaaacatcttaaattggggagtgca
gaagaatttaactacacaagaatgggaggcagtactgtcattgagggtgtgaatgacaga
gcagacatggtggagactcggaagaccttcacactgctgggtttcaaggaggattttcag
atggatgtttttaagatcctagcagccatcttacatctgggcaatgtgcagatcacagcg
gtgggccacgagaggtccacagtcagtgaggacgacaggcacctgaaggtgttctgtgag
ctcctgggcctggagagtcgcaaagttgctcagtggctgtgcaatcgcaaaatcatcaca
acctccgagacagtggtgaagcccatgaccaggccccaggcggtcaatgccagggatgca
ctggccaaaaagatctacgctcacctgttcgacttcattgtggagagaattaaccaagcg
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacagttctgcatcaattacgctaacgagaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccttggactctgatagatttttatgacaaccaaccagtgattgacctgattgaagcaaaa
atgggtattttggagttactggatgaagaatgcttgttaccacatgggactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacaggaactctttgttcgaaaaacccaga
atgtcaaatacgtcctttatcatccagcactttgctgacaaggtagaatataaatgtgaa
ggtttccttgagaagaacagagataccgtctatgacatgctggttgaaatcatgagagcg
agcaagttccatctctgtgccaacttttttcaagaaaatccagttcctccttcccctttc
agttcagcaatcacagtgaaatctgcaaagccagtcatcaagccaaacaacaagcagttc
cggaccacagtgggaagcaagttccgcagctctctgtatttgctcatggaaaccctcaat
gcgaccacaccccactatgtccgatgcatcaagccgaacgatgagaaattacccttcgag
ttcgactccaaaaggattgttcagcagctgcgagcctgcggcgttttagagacgattcgc
attagtgcccagagctacccttccaggtggacatacatcgagttctacagtcgctacggt
gtgctcatgaccaaacaggagctttcgttcagcgataaaaaggaggtgtgcaaagtggtt
ttacagaggctcatccaggattctaatcagtacgagtttggtaaaaccaaaattttcttc
agagcaggacaagtggcctatttagagaaactccgactggataagctcaggcagagttgt
gttgtgatacaaaagcacatccgtggctggctccagagaaaaaaattcctccgagaaaga
caagctgccctgaccatccagcagtacttccggggtcagcaaactgtgaggaaagctgtt
acggcaacagccttgaaagaagcatgggcagccatcatcattcagaagtactgtcgtggg
tatctcgtccgcaatttgtaccagctcattcgcgtggccaccatcaccatccaggcctac
acccgaggactcctggcaaggaggaggtatcgaaagatgctggaggaacacaaggctacg
atccttcagaaatatgcacgggcgtggctggccagacgcagattccagagtatccgacga
ttcgtgctcaacattcagcttacttacagggtccagcgtttgcagaaaaagctagaagat
cagaacaaagagaaccatgggctggtggagaagctgaccagcctggctgctcttcgggct
ggtgacatggagaagattcagaaactggaatccgagctggacagagcagctgcccacaga
cacaattatgaggagaaggggaggaaatacaaggctgccatagaagagaaattggcaaag
cttcagaagcataattcagaactggaaatacagaaagagcaagcagagctgcagctccaa
gagaagactgaagagctgaaagaaaaaatggacgacctcaccaagcagctctttgatgat
gtgcaaaaagaagaacaacagagaatacttcttgaaaaaagttttgaactgaaaacacaa
gactatgagaagcagatctggtctttgaaagaagaccttcaagccctcagggatgagaaa
atgcacctgcagcaccaactagaggaagaacgtgtcacctccgatggcttacagggggag
gtggcccaactgagaaagcaggcaaagacaatctctgagttcgaaaaggagatagagctg
cttcagacacagaagatagatgtggagaaacacgtgcagtcacagaaacgggaaatgaga
gaaaagatgtccgagatcaccaaacaactccttgaaagctatgacattgaagatgttaga
agcaggctctcgttggaagatttggaacatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagcaacacacgtgttggagagccatttccagtcccagaaggac
tgctacgaaaaggagatcgaagctttgaacttcaaagtggtgcatctaagtcaagaaatc
aaccatctgcagaaattatttagagaagagactgacatcaatgaaagtatccgtcatgaa
gttaccaggctaacatcggagaatatgatgatcccagactttaaacagcagatttcagaa
ctggagaaacagaagcaagatctggaaatccgcctgaatgaacaaacggaaagcatgaaa
ggaaaactggaagaattgtctgatcagttgaaccgcaatcgagaagaggaaggaacacaa
agaaagaccatagaggcccaaaatgaaatacacaccaaagagaaagagaagctgatcagt
aagattcaagaaatgcaggaggccagcgagcacctgaagaaacaatttgaaactgaaagt
gaagtcaagagtactttccggcaggaagcatctcgtctaactatggaaaacagggatctt
gaagaagagttagacatgaaagacagagtgattaaaaagctacaagatcaagtcaagact
ctaaccaagacaattaaaaagggcgatgatgtgcacttgtcctcaggacccaaggagtac
cttggaatgctggaatacaagacggaagatgaggacaagctcatccaaaacctcattctt
gacttgaagcctcgtggcgtggtggtgaacatgatcccggggctgccggctcacctcctg
ttcatgtgcgtacgctatgcagactctctaaatgacgccagcatggtcaagtccctcatg
aacagcaccatcaatggcatcaagcaggtggttaaggaacatgtagacgactttgaaatg
ctgtctttttggctttccaatacgtgtcatttcctcaactgcctgaagcagtacagtgga
gaagaggagttcatgaagctcaatggtccacatcagaataagaattgcttgaacaatttt
gacctttcagaatacagacagattctgagtgatgtggccatacgaatatatcatcggttc
attgttgtgatggaaaataacattcaaccaatcatagtgccaggcatgctggagtacgag
agcctgcaaggcatttctggcctgaagcccacaggcttccggaagcggtcatctagcata
gatgacacggacgcctacacaatgacctccgtcctgcagcagctgagttacttctacagc
accatgtgccagaacggcctggaccctgagctggtgaggcaggccgtgaagcagctcttc
ttcttgatcggggccgtcaccctgaacagcctcttcctacggaaagacatgtgctcctgc
agaaaagggatgcagatcaggtgcaacatcagctacttagaagaatggcttaaagataag
aatttgcagaatagcttggccaaggaaactttggaacctctatctcaggcagcctggttg
cttcaggtcaagaagaccacagacagcgatgccaaggagatctatgaatgctgtacctca
ctgtctgctgtgcagatcataaagatccttaattcatacacacctatcgatgactttgag
aaaagagtgactccatccttcgttcgcaaagtacaggctctcctaaatagccgggaggat
tcatcacaactgatgctggatacaaaatatctctttcaagttacatttccttttaccccc
tctccacatgctctggaaatgatccagatccccagcagttttaagctaggctttctcaat
agattatag
DBGET
integrated database retrieval system
