Ailuropoda melanoleuca (giant panda): 100467537
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Entry
100467537 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-11
KO
K16494
protocadherin beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100467537
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Protocadherins
100467537
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100467537
NCBI-ProteinID:
XP_002912595
LinkDB
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Position
3:29019028..29023088
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AA seq
880 aa
AA seq
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MVALQDNIAGGKTTLDDGPDTVTQGAQSGGKTERTRLQGANYKLLNRVKILRPPKIRWTL
AEARFPELRREAEAILREAFLKGVMENGRADTLQIRQVLLLFVLLGMSQAGSESGRFSVA
EEMQSGSFVGNLVKDLGLEVRELFSRGAQVVSNDNKRRLQLDINTGDLLLSESLDREELC
GSTEPCVLHFQVLMKNPLQFLRIELQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLES
AKDLDVGINALKNYTISPNSYFHIKMRVNPDNRKYPELVLDKPLDYEEQSELSFILTALD
GGSPPRSGTASVRVVVVDINDNSPEFEQPFYEVKTPENSILGSIIVTVSARDLDSGKNGE
ISYSFSHASEDIRKTFEINQKSGEVSLTASMDFETIESYSIIIQATDGGGLFGKSTVRIQ
VMDVNDNAPEIAVSSITSPIPENLPETVVMVFSIRDRDSGDNGRMICSIPEDLPFMLKSS
FENYYTLETEGMLDRESEAEYNITITVTDLGTPRLKTQQSVTVSDVNDNAPAFSQSSYTL
RVRENNSPALHIGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALR
ALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVP
RAAEAGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVK
HRLLVLVKDNGEPPLSASVTLHVLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASV
SSLFLVSVLVFVAVRLCRRSRAASEGGCAVPEGPFAGHLVDVSGTGTLSHSYQYEVCLRG
GSGTGEFKFFKPIIPNVPPQCPGKEREENPTFQNSFGFNM
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgctgcaggataacatcgcgggaggaaaaactacactggatgatggtccggac
actgttacccagggcgcacagagcggtgggaagacagaaagaacacgccttcaaggggcg
aactacaagctacttaacagggttaaaatccttaggcctccgaagattcggtggacatta
gcagaggcacgtttcccagaactgcgaagagaagctgaagcgattctgcgggaagctttc
cttaaaggagtgatggagaacggaagggcagacactctgcagataaggcaagtcctgctt
ctttttgttttgctaggaatgtctcaggcgggttccgagtctgggcgcttttcggtggca
gaggaaatgcagagcgggagctttgtaggcaatttggttaaggacctgggactagaagtg
cgtgagctgttctcaaggggggctcaggtagtctctaatgataacaaaaggcgtttgcag
ctggacataaacaccggagatttgctcttaagcgaatcgctagaccgggaagagctctgt
ggctccacggagccctgcgtgttgcatttccaggtattaatgaaaaaccctttgcagttt
ttacggattgagctccaggtcagggatataaatgaccattctccagtcttcttagaaaaa
gaaatgctcttagaaatcccagaaaatagtcctgttggtgctgtgttcttactagaaagt
gcaaaggatttagatgtaggaatcaatgctctaaagaactacacaataagccccaactct
tatttccacattaaaatgagagtcaatccagacaataggaaatatccagagttggttctg
gacaagccactggattatgaagagcagtccgagctcagtttcatcctcactgctctggat
ggcgggtctccgcccaggtctgggacggcctcggttcgagtggtggttgtggacattaac
gacaattcccctgagtttgagcagccattttatgaggtgaagactccagagaatagcata
ttgggctcaatcattgtcaccgtctcagctcgggatttagactcaggaaaaaatggagaa
atatcatattctttttcccatgcctcagaagatattcgcaagacatttgaaattaatcaa
aagtctggagaagtcagtttaaccgcatccatggattttgaaacaattgaatcatactca
ataataattcaagctacagatgggggcggcctttttggaaaatcaacagtcagaattcaa
gtgatggatgtgaatgacaatgctcctgaaatcgctgtgtcatcaattaccagtccaatc
ccggaaaatttgcctgagactgtggttatggtttttagcatccgagacagagactctggg
gacaatgggaggatgatttgttctatcccagaagaccttcctttcatgctaaaatcttcg
tttgagaattactacacattggaaacggagggaatgctggatagagagagtgaggccgag
tacaacatcaccatcaccgtcaccgacctggggacccccaggctgaaaacccagcaaagc
gtgacggtgtccgacgtcaacgacaacgcccccgccttcagccaaagctcctacaccctg
cgggtccgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacaga
gacgcgggcgccaacgcccaggtcacctactcgctgctgctgccgccccacgacccgcac
ctgcccctggcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagg
gcgctggattacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggc
tcgcccgcgctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaac
gcgcccttcgtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgccc
agggcggccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggc
cagaacgcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtg
tgggcgcacaacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaag
cacaggctgctggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacg
ctgcacgtgctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcg
gcggccgaggcccgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtg
tcgtcgctcttcctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagc
cgggcggcgtcggagggcggctgcgcggtgcccgagggcccgtttgcgggccacctggtg
gacgtcagcggcacggggaccctgtcccacagctaccagtatgaggtgtgtctgagggga
ggctcagggaccggcgagttcaagttcttcaagcctattatccccaacgtcccaccccag
tgccctgggaaagaaagggaagaaaatcctaccttccagaatagctttgggttcaatatg
tag
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