Ailuropoda melanoleuca (giant panda): 100467671
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Entry
100467671 CDS
T01329
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
100467671 (PRDM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100467671 (PRDM4)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100467671 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_16
SET
zf-met
zf-C2H2_jaz
Zn_ribbon_Com
PyrI_C
Motif
Other DBs
NCBI-GeneID:
100467671
NCBI-ProteinID:
XP_034499294
Ensembl:
ENSAMEG00000016174
UniProt:
G1MCK6
LinkDB
All DBs
Position
15:complement(76677240..76735578)
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AA seq
808 aa
AA seq
DB search
MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALSIANNASALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
SDGHEVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSV
SNNLAADTVGHGGVIPIHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPPSLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSV
VGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKMYHNGVLEFCIITTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGVPE
HPDVHLCNCGKECNSYTEFKAHLTSHIHNHLHSQGHSSSHGPSHSKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTCSSSAQEEEEDDDSEEEELADSVG
TEDCQINSAVYSADESLSAHNQQSNGDG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagtccagtggggatggagcagctgacttca
tcctctgtgagcaatgccttgccagtctcagggagtcatttagggttggctgcttcaccc
actcacaatgccatccctgccccgggcctgccagtggcgattccaaatttgggtccctcc
ctgagctctttgccttctgctttgtctctgatgctcccaatgggtattggggatcgaggg
gtgatgtgcgggttgcccgaaagaaactacaccctacctccaccaccttacccccacctg
gagagcagttacttcagaaccattctacctggcattttatcttatttagctgacagacca
cctcctcagtatatccaccctaattctataaatgttgatggtaatacagcattatctatc
gccaataacgcttcagctctagatccctatcagtccaatggaaatgttggattagaacca
ggcattgtttcaatagactctcgttctgtgaacacacatggtgcccaaagtcttcatccc
agtgatggccatgaggtggccttggacacaacaatcactatggagaacgtctctagggtt
accagcccaatctctacagatggaatggcagaagaacttacaatggatggtgttgcaggc
gagcattcccaaatcccaaatggctccagaagtcatgaacctctgtctgtagattctgtg
agcaacaaccttgcagcagacactgtaggacatggtggtgtgatacccattcatgggaat
ggtctggagctccctgtggtcatggagacagaccacattgcaagtcgggtcaacgggatg
tctgacagtgccctcagtgactccattcacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagaatctgtttccctccatgaagtt
ggcctaagcctagaacctgtggctgtctcctccatcacccaggaggttgctatggggaca
ggtcatgtagatgtatcttcagacagtctttcttttgtaccaccttcactgcaaatggaa
gactccaattcaaacaaggaaaatatggcaactttgtttacaatttggtgcactctctgt
gaccgagcctatccctcagactgccctgatcacggaccagtgacttttgttcctgacact
ccaatagagagtagagcgaggctttctctcccaaagcagcttgttctccggcagtcagtt
gtgggagcagaagttggtgtgtggactggagaaaccattcctgtgcgtacttgctttggg
cctctcattggccaacagagtcactccatggaagtagcagaatggacagacaaggcagtc
aaccatatctggaagatgtaccacaatggtgtcctagaattctgcatcattacaactgat
gaaaatgaatgtaattggatgatgtttgtgcgcaaagccaggaaccgggaagagcagaat
ttggtggcgtatccccatgatggaaaaatctatttctgcacctcacaagatatccctcct
gaaaatgaactgcttttttattacagccgggattatgctcagcagattggtgttcccgaa
cacccagatgtgcacctctgtaactgtggcaaggagtgcaattcctatacagagttcaaa
gctcaccttaccagccacatccataaccatcttcatagccagggccacagcagcagccat
gggccaagccacagcaaagaaaggaagtggaagtgctcaatgtgcccccaggcttttatc
tctccttccaaacttcatgtccactttatgggtcacatgggtatgaagccccacaagtgt
gatttctgtagcaaggcttttagtgatcccagcaacctgcggacccacctcaagatacat
acaggtcagaagaactacagatgtactttgtgtgacaagtctttcacccagaaggctcac
ctagagtcccacatggttatccacacgggcgagaagaatctcaagtgtgattactgtgac
aagttgtttatgcggaggcaggacctcaagcagcatgtgctcatccacacacaagaacgc
cagatcaagtgtcccaagtgtgataagctgttcttgagaacaaatcacttgaagaaacat
ctcaattctcacgaaggaaaacgggattatgtctgtgaaaaatgtacaaaggcttatctt
accaaatatcatctcacccgccacctaaaaacctgcaaaggtcccacctgcagttcatca
gcacaagaggaggaggaagatgatgactcagaggaagaagaactggcagactctgtgggg
acagaagactgtcagattaacagtgctgtgtattcagcggatgagtctctctcagcacat
aaccagcagtcgaatggggatggataa
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