Ailuropoda melanoleuca (giant panda): 100467792
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Entry
100467792 CDS
T01329
Symbol
PCDHB16
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-16
KO
K16494
protocadherin beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100467792 (PCDHB16)
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Protocadherins
100467792 (PCDHB16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
Cadherin_4
DnaJ-like_C11_C
Motif
Other DBs
NCBI-GeneID:
100467792
NCBI-ProteinID:
XP_002912596
Ensembl:
ENSAMEG00000020133
LinkDB
All DBs
Position
3:29004813..29008416
Genome browser
AA seq
796 aa
AA seq
DB search
MEIGWMHYLRQRQVLVFFVLLSMSGVGAELEPYSVAEEVEIGSFVANLGKDLGLGLTELS
TRGARIISQGNKEYLQLKVQTGDLLINEKLDREELCGSTDPCLLYFQLLMEKPLEVFQAE
LRVEDINDHSPVFTEKEMILKIPENSPLGIAFPLSNALDLDVGSNNVQNYKISPNSQFRV
LTRKLSDGRMYPELVLEEELDREVEPEIVLTLTALDGGSPPRYGTAQVLIEVVDSNDNAP
EFGQPIYKVHIPENSPVGSLVVTVSASDLDSGIYGKISYTLFQPSEDISKTLEVNPVTGE
IRLKKQVDFETVLSYEVDIKATDGGGLSGKCTLLLQVVDVNDNPPEVTMSALTSPIPENS
PEIVVAVFSVSDPDSGDNGKTISSIQDDLPFLLKPSVKNFYTLVTERALDREERAQYNIT
ITVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDA
GANAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGSP
ALSSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQN
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLLVLVEDNGEPPLSASVTLH
VLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLVSVLVFVAVRLCRRSRA
ASGGGCAVPEGPFAGHLVDVSGTGTLSHSYQYEVCLRGGSGAGEFKFLKPIIPNLQLQST
GREVEENYPFRNSFGM
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggatgcattatctgagacaaaggcaagtccttgttttctttgttttg
ctgagcatgtctggggtgggtgctgagttagagccctattcagtagcggaagaagtggag
ataggctcctttgtggcaaatctaggaaaagatctggggttgggactgacagagctgtcc
acccgaggggctcggatcatttctcaggggaacaaagagtatttgcagctcaaggttcag
actggggatttgctcataaatgagaaacttgatcgagaagagctatgcggttcaactgac
ccttgcttactgtattttcaactgttaatggaaaaacccttagaggtatttcaggctgaa
ctgagggtggaagacataaatgaccattctcccgtgttcactgaaaaagaaatgattcta
aaaataccagaaaacagtcctctaggaattgcattccctctgagtaatgctctggacttg
gatgtaggaagcaacaatgttcaaaactataaaatcagccccaattcccagttccgggtt
ctaacccgcaaactcagtgatggcagaatgtaccccgagctggtgttggaagaagagctg
gacagggaggtagagcctgaaatcgtattaaccctgaccgcgctggatggcggctctcca
cctcggtatgggacagcgcaagtgctcattgaagtggtggacagcaacgataatgcccct
gagtttgggcagcccatctacaaggtgcatattcctgagaacagcccggtaggctccctc
gttgtcactgtttctgccagcgatttagacagcggaatctatggaaaaatatcctacaca
ctctttcagccttcagaagatattagcaaaactttggaagtaaatcctgtaacaggagaa
attcgactgaaaaagcaagtagattttgaaacagttttatcctatgaagtagacatcaag
gccactgatggcggaggtctatcaggaaaatgcactcttctcctccaggtagtggatgtg
aatgacaatcctccagaagtgaccatgtctgcacttaccagtccaatcccagagaactca
cctgagattgtagttgctgttttcagtgtttcagatcctgactctggggacaacgggaag
accatttcctctatccaggatgaccttccttttcttctaaaaccttcagtaaagaacttt
tacactttggtaacagagagagcactagacagagaagaaagagcccagtacaacatcacc
atcaccgtcaccgacctggggacccccaggctgaaaacccagcacaacttaaccgtgacg
gtgtccgacgtcaacgacaacgcccccgccttcagccaaagctcctacaccctgcgggtc
cgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagacgcg
ggcgccaacgcccaggtcacctactcgctgctgctgccgccccacgacccgcacctgccc
ctggcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagggcgctg
gattacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgccc
gcgctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaacgcgccc
ttcgtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgcccagggcg
gccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaac
gcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcg
cacaacggcgaggtgcgcaccgcccggctgctgagcgagcgcgacgccgtcaagcacagg
ctgttggtgctggtcgaggacaatggcgagccgccgctgtcggccagcgtcacgctgcac
gtgctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggcc
gaggcccgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtgtcgtcg
ctcttcctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcg
gcgtcggggggcggctgcgcggtgcccgagggcccgtttgcgggccacctggtggacgtc
agcggcacggggaccctgtcccacagctaccagtatgaggtgtgtctgaggggaggctca
ggggccggtgagttcaagttcttgaagccgattatccctaatctgcagcttcagagcaca
gggagggaagtggaagaaaattaccccttcagaaatagttttgggatgtaa
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