KEGG   Ailuropoda melanoleuca (giant panda): 100467802
Entry
100467802         CDS       T01329                                 
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03410  Base excision repair
aml04140  Autophagy - animal
aml04217  Necroptosis
aml04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100467802
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100467802
  09143 Cell growth and death
   04217 Necroptosis
    100467802
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100467802
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100467802
   03400 DNA repair and recombination proteins [BR:aml03400]
    100467802
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100467802
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    100467802
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100467802
   MMR (mismatch excision repair)
    Other MMR factors
     100467802
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100467802
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_box_5 NOA36
Other DBs
NCBI-GeneID: 100467802
NCBI-ProteinID: XP_034507948
Ensembl: ENSAMEG00000025293
LinkDB
Position
Unknown
AA seq 212 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD
NT seq 636 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaagcggacaaggcccgttatgaaagagaaatgaaaacctatatccct
cccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggag
gaagatgaagaagatgaagatgaagaagaagatgat

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