Ailuropoda melanoleuca (giant panda): 100467816
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Entry
100467816 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03040
Spliceosome
aml05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100467816
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100467816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100467816
03041 Spliceosome [BR:
aml03041
]
100467816
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100467816
mRNA cycle factors
Common to processing body (P body) and stress granule
100467816
Spliceosome [BR:
aml03041
]
Common components
Common spliceosomal components
hnRNP proteins
100467816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
100467816
NCBI-ProteinID:
XP_034517707
LinkDB
All DBs
Position
6:7408516..7414355
Genome browser
AA seq
368 aa
AA seq
DB search
MELKSTVHCDCCDRAKRNKGVWAEELLSALGHHRVSIIKVPAPTAVLSKSEPPKEPEQLQ
KIFTGGLSFETTNEGLRSHFEQWGILTDSVVMRRPNTKHSRSFGFITYATAEEVEAAMNA
RPHKLDGIVAESKRAVSREYSQRPVAHLTMKKIFVDGVKEDTEEHHLRDYFEQHGKIEVI
EIMTDRGTGRKRGFAFVMFDDHDSVDRLSFKNPIRPHVVNGHNGEGRQALSKQEMASASS
SQGGQSRSGNSSGSCESGFGGNDNFGHGGNFSRQGGFGGSRGGGGYGGSGDGYGFGNDGS
NFGGGGSCNDSGNCNSKFSNFGPMKGGNFGGRSSGPYGGGGQYFAKPXIQAGYGGSSSSN
SYSCGRTF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagagtactgtgcactgcgactgttgcgacagagcgaaaagaaataaagga
gtttgggcagaagaattgctttctgcccttggacaccaccgagtaagtatcattaaagtc
cctgcccccaccgctgtcctgtctaagtcagagcctcccaaagagcctgaacagctgcag
aagatcttcactgggggtttgagctttgaaacaaccaatgagggtctgaggagccatttt
gagcaatggggaatactcacagacagtgtggtaatgagacgtccaaacaccaaacattcc
agatcctttgggtttatcacgtatgccactgcggaggaggtggaggcagccatgaacgca
aggccacacaagctggatggaattgttgcggaatcaaagagggctgtctcaagagaatat
tctcaaagacctgttgcccacttaactatgaaaaagatttttgttgatggcgttaaagaa
gacactgaagaacatcatctaagagattattttgaacagcatgggaaaattgaagtgatt
gagatcatgactgaccgaggcactgggagaaagagaggctttgcttttgtaatgtttgat
gaccatgactctgtagacagattgtcctttaaaaatcccatacggccacatgtggtgaat
ggccacaacggtgaaggaaggcaagccctatctaagcaagaaatggctagtgcttcatcc
agtcaaggaggtcaaagtcgttctggaaactctagtggcagttgtgaaagtggttttggt
gggaatgacaactttggtcatggagggaacttcagcagacaaggaggctttggtggcagt
cgaggtggtggtggatatggtggcagcggggatggctatggatttggtaatgatggaagc
aattttggaggtggtggaagctgtaatgattctggcaattgcaacagtaaattttcaaat
tttggacccatgaaaggaggaaattttggaggtaggagctctggcccctatggtggtgga
ggccaatactttgccaaaccatgaatccaagctggctatggcggttccagcagcagcaat
agctacagctgtggcaggacgttttaa
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