Ailuropoda melanoleuca (giant panda): 100467851
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Entry
100467851 CDS
T01329
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100467851 (DDX18)
03009 Ribosome biogenesis [BR:
aml03009
]
100467851 (DDX18)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100467851 (DDX18)
Spliceosome [BR:
aml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100467851 (DDX18)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
90S particles
Helicases
100467851 (DDX18)
Pre-60S particles
100467851 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
100467851
NCBI-ProteinID:
XP_002922942
Ensembl:
ENSAMEG00000012626
UniProt:
D2HKQ4
LinkDB
All DBs
Position
2:complement(101633538..101649187)
Genome browser
AA seq
669 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASDVSLSEMQNGDVSEETVGGGKIKKSLKQS
MNVGLPEAQNGEIAKETVETVQIKKKKKKSTIIINGEAATQPPNSESKKKKKKKRKMVDD
AGPDTKKVKTEDKGDSEEGAQAPEETENSVEKPDDEEEDSEVPSLPLGLTGAFEDTSFAS
LSNLVNEHTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELI
VKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNG
INIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM
LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK
KNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSGILLC
TDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYL
KQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNV
NNLNLPQVALSFGFKVPPFVDLNVNSNDGKLKKRGGGGGFGYQKAKKVEKSKIFKHISKK
SSDSRQFSH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatctacctatgaaactcctgcgcaagaagatcgagaaacggaacctcaaattg
cgccagcgaaacttaaagctccagggggcctcggatgtgagcttatcagaaatgcaaaat
ggagatgtgtctgaagaaacagtgggaggtggaaagattaaaaaatccctaaaacagtct
atgaatgtgggcttgccagaagcccagaatggagagatagctaaagaaacagtagaaact
gtacaaattaaaaaaaaaaagaagaaatctaccataataatcaatggagaagcagcaaca
cagcctcccaattcagagtcaaaaaagaagaagaagaaaaagagaaaaatggtggatgat
gctgggcctgataccaaaaaagtgaaaactgaagacaaaggggactctgaagaaggggcc
caagctcctgaggagacagaaaacagtgtggagaagccggatgacgaggaagaagacagt
gaagtgcccagcctacccctgggactgacaggagcttttgaggatacttcatttgcttct
ctttctaatcttgtcaatgagcacactctgagggcaataaaagaaatgggttttacaaac
atgactgaaattcagcataaaagtatcagaccacttctggaaggcagggatcttctagca
gccgcaaaaacaggcagtggcaaaacgctggcatttctcatccctgcagtcgaactcatt
gtcaagttaaagttcatgcctaggaatggcactggagttcttattctctcgcctactagg
gaactggccatgcagactttcggtgttcttaaggagctgatgacgcaccacgttcacaca
tatgggttgataatgggcggcagcaacaggtctgcggaagcacagaagctcggtaatggg
atcaacatcatcgtggccacccccggccgcctcctggaccacatgcagaataccccaggg
tttatgtataagaatctgcagtgtctggttatcgatgaggctgatcgtatcttggatgtt
gggtttgaagaggaattgaaacaaattattaaacttctgccaacacgcaggcagaccatg
ctcttctctgccacacaaactcgaaaagttgaagacttggcgaggatttctttgaaaaag
gagccgttgtatgttggagttgatgacgataaagctaacgcaaccgtggacggtctcgag
cagggatatgttgtctgtccctcggagaagcgattcctcctgctctttacattccttaag
aagaaccggaagaagaaactgatggtcttcttttcatcctgtaagtccgtgaagtaccat
tacgagttgctgaactacatcgatctgcctgtcttggccattcatggaagacagaagcag
aataagcgcacgaccacgttcttccagttctgcaacgcagattcggggatactgttgtgt
accgacgtggcagcgcgaggcctggatatccctgaagtcgactggattgttcagtacgac
cctcctgatgaccccaaggaatatattcatcgtgtgggaagaacagccagaggcctaaac
gggagagggcatgccttgctcattttacgccctgaagaattgggtttccttcgttactta
aagcaatccaaggttccattaagtgaatttgagttttcctggtccaaaatttctgacatt
cagtcccagcttgaaaaattgattgaaaagaactacttccttcataagtcagcccaggaa
gcatataagtcctacattcgggcgtatgattcccattctctgaaacagatcttcaatgtt
aataacttaaatttgcctcaagtggctctgtcgtttggtttcaaggtgcctccttttgtt
gatctgaacgtgaatagcaacgacggcaagcttaaaaagagaggaggcggtggtggcttt
ggctaccagaaagccaagaaagtcgagaagtccaaaatcttcaaacacatcagcaagaag
tcctccgacagcaggcagttctcccactga
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