KEGG   Ailuropoda melanoleuca (giant panda): 100467863
Entry
100467863         CDS       T01329                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X2
  KO
K14004  protein transport protein SEC13
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03013  Nucleocytoplasmic transport
aml04141  Protein processing in endoplasmic reticulum
aml04150  mTOR signaling pathway
aml05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100467863 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100467863 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100467863 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100467863 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100467863 (SEC13)
   04131 Membrane trafficking [BR:aml04131]
    100467863 (SEC13)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100467863 (SEC13)
Membrane trafficking [BR:aml04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    100467863 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100467863 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    100467863 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_Gbeta WDR55 Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 100467863
NCBI-ProteinID: XP_002925064
Ensembl: ENSAMEG00000015994
UniProt: G1MC17
LinkDB
Position
4:complement(50062499..50094852)
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKISNAHAIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDTSGNTWSPKLLHKFSDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASITEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggacacctcccatgaggacatgattcacgacgcccag
atggactactatggcacccgcctagcaacctgctcatcagacaggtccgtcaaaatcttc
gatgtgcgaaatggaggacagattctcattgccgacctaaggggtcatgagggtcctgtg
tggcaagtggcctgggctcaccccatgtatggcaacatcctggcatcctgctcctatgac
cggaaagtcatcatctggaaggaggagaatggcacgtgggagaagacgcacgagcacacg
ggacacgactcctcagtaaactctgtgtgctgggccccccatgactacggcctcatactg
gcctgtgggagctcggatggggccatctccctgctgacgtacactggagagggccagtgg
gaagtgaagaagatcagcaacgctcacgctattggctgcaatgccgtcagttgggcccct
gctgttgtacctggaagcctcatagaccagccatcggggcagaagcccaactacatcaag
aagtttgcatcgggcggttgtgacaacctcatcaaactgtggaaggaggaggaggacggc
cagtggaaggaggaacagaagctagaagcacacagtgactgggttcgagatgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagttgctcccaggacggtcgtgtg
ttcatttggacttgtgatgacacctcaggcaatacgtggtcacccaaactgttgcacaag
ttcagtgacgttgtgtggcatgtgagctggtccatcacagccaacatcctggctgtctcg
ggcggagacaacaaggtgaccctgtggaaggagtccgttgacgggcagtgggtgtgcatc
agtgatgtcaacaagggccagggttccgtgtctgcttccatcacagagggccagcagaac
gagcagtga

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