Ailuropoda melanoleuca (giant panda): 100467863
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Entry
100467863 CDS
T01329
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X2
KO
K14004
protein transport protein SEC13
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03013
Nucleocytoplasmic transport
aml04141
Protein processing in endoplasmic reticulum
aml04150
mTOR signaling pathway
aml05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100467863 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100467863 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100467863 (SEC13)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100467863 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100467863 (SEC13)
04131 Membrane trafficking [BR:
aml04131
]
100467863 (SEC13)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100467863 (SEC13)
Membrane trafficking [BR:
aml04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100467863 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100467863 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
100467863 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_Gbeta
WDR55
Beta-prop_RIG_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
100467863
NCBI-ProteinID:
XP_002925064
Ensembl:
ENSAMEG00000015994
UniProt:
G1MC17
LinkDB
All DBs
Position
4:complement(50062499..50094852)
Genome browser
AA seq
322 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKISNAHAIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDTSGNTWSPKLLHKFSDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASITEGQQNEQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagtaattaacactgtggacacctcccatgaggacatgattcacgacgcccag
atggactactatggcacccgcctagcaacctgctcatcagacaggtccgtcaaaatcttc
gatgtgcgaaatggaggacagattctcattgccgacctaaggggtcatgagggtcctgtg
tggcaagtggcctgggctcaccccatgtatggcaacatcctggcatcctgctcctatgac
cggaaagtcatcatctggaaggaggagaatggcacgtgggagaagacgcacgagcacacg
ggacacgactcctcagtaaactctgtgtgctgggccccccatgactacggcctcatactg
gcctgtgggagctcggatggggccatctccctgctgacgtacactggagagggccagtgg
gaagtgaagaagatcagcaacgctcacgctattggctgcaatgccgtcagttgggcccct
gctgttgtacctggaagcctcatagaccagccatcggggcagaagcccaactacatcaag
aagtttgcatcgggcggttgtgacaacctcatcaaactgtggaaggaggaggaggacggc
cagtggaaggaggaacagaagctagaagcacacagtgactgggttcgagatgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagttgctcccaggacggtcgtgtg
ttcatttggacttgtgatgacacctcaggcaatacgtggtcacccaaactgttgcacaag
ttcagtgacgttgtgtggcatgtgagctggtccatcacagccaacatcctggctgtctcg
ggcggagacaacaaggtgaccctgtggaaggagtccgttgacgggcagtgggtgtgcatc
agtgatgtcaacaagggccagggttccgtgtctgcttccatcacagagggccagcagaac
gagcagtga
DBGET
integrated database retrieval system