Ailuropoda melanoleuca (giant panda): 100467875
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Entry
100467875 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
KO
K16512
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aml03037
]
100467875
Cilium and associated proteins [BR:
aml03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100467875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
C2
Motif
Other DBs
NCBI-GeneID:
100467875
NCBI-ProteinID:
XP_034504504
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All DBs
Position
20:1157065..1203669
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AA seq
927 aa
AA seq
DB search
MLKLCNKDVTSHTFEYPTXSLLAPYLRPIFSMLDSSNQPHWNPQLGEQLQQQVSQLQDQL
EAELQERRKVLLQLSREKAQNKDLQLEVTNLLQKHKQEVEILQKQETISQSPDRQSEPAA
QPALFQETDPTEPCEPKNQEEKKLSQMLSELQVSHAETTLELEKTRDMLLLQRKINVCYQ
EELEAMMTKADNENKDHKEKLERLHQLLDLKNNRINQLEGILRSHGLPISEQLKDVAYGT
RQLSLCLETLPTRGDEEEVDISLLHQSENLFELHIHQAFLTSAALAQAGDTEPTTFCTYA
FYDFETHCTPLAVGPQPLYDFTSQYVVETDSLFLSYLHGASARFDLHQAVASEHHTLAAG
WICFERVLETVEKVHGSTILTGAGGEDCGVLEYWMRLRFPIGPCLQAGNKRKKAQAYLSA
SVFGACEAQEDQSRSETWKHQNELRVEIIRCYGLQSRRLGTQPSPYVMYRFFTFSDHDTA
IIPASNNPYFRDQARFPVLVTSDLDKYLRREALSVYVFDDEDSEPGSYLGRVQVPLLPLA
QNKSIKGDFNLTDPAGNPNGFVEAQLDWKSFYLPPESFLKPEAQPEEDTKDGLELSSEEE
KASFSPQDQMAFAEIPIEAGQYQAKRKPPQVGERKEREHQVASYSRRKHGKRTGVQGKNR
MEYLSRNILTGNTLQQVNYTEWKFSGLKSSIDDGLKNQQKEEEMTSSHSAVMEKEALNPV
NDKESCEQASEVSEAPTTDSDDIVTPASLKCPKAGSEKMCIEIISLAFYPEAGVMCDESV
KQVYVEYKFYDLPLSETETPVSLRKPQAGEEIHFHFSKVIDLDPLEQKGRRQFLFAMLNR
QDPEQGRLKFTVVSDPMDDEKKECQEVGYAFLELWQNMESGKDGVEQGLDIVSSEDQATK
IGRLKVSLRAAAALHAIYKEMTEERFS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaactgtgtaataaagacgtcacatcacatacctttgagtatccgacangctct
ctccttgctccttacttgcgtcccattttcagcatgctggacagcagtaatcagcctcac
tggaaccctcagctcggagaacagctccagcagcaagtctctcagttgcaggaccagctg
gaggctgagcttcaggagaggagaaaagtcttacttcagctgtccagagagaaagctcaa
aacaaggatctgcagcttgaagtcaccaatctgcttcagaagcataagcaggaagtagag
atcctccaaaagcaagagacaatttcccagtctcctgacagacaatccgaaccagccgct
cagccagctctattccaagagactgatccgacagagccctgtgaaccgaaaaaccaagaa
gaaaagaaactgtcccagatgttaagtgagttgcaagtatcgcacgcagagaccacgctg
gaactagaaaagaccagagacatgctccttctgcagcgcaaaatcaacgtgtgctatcag
gaggaactggaggcaatgatgacaaaagccgataatgaaaataaagatcacaaggaaaaa
ctggagaggttgcatcaactactagacctcaagaataatcgtatcaatcagctggaaggt
attttgagaagccatggccttccgatatccgaacagctcaaagacgtggcttatggcacc
cgacagttgtccttatgtctggaaacactgccgactcgtggcgatgaggaggaagtggac
atttccctgctgcatcagagtgaaaatctttttgaactacacatccaccaggccttcctg
acatctgctgccctggctcaggctggagacactgaacctaccactttctgcacctatgca
ttctatgattttgaaactcactgtaccccactagctgtggggccacagcccctctatgac
ttcacttcccagtacgtggtggaaacagattccctttttttgagctaccttcatggggct
tcagcccggtttgatctacaccaggctgtagccagtgagcaccacacccttgcagctgga
tggatttgctttgagagggtgctggagactgtggagaaggtccatggctctaccatactt
actggagctggtggagaagactgcggggtgctagaatactggatgaggctgcgctttccc
ataggaccctgcctacaagcaggcaataagcgcaagaaagctcaggcctacctgtcagcc
agtgtgtttggagcctgcgaggcccaggaggatcagtccagatcggagacttggaagcat
cagaatgagctgcgggtggaaatcatcagatgctacggcctccagagtcgacggctggga
acccagcccagtccatacgtcatgtaccgcttcttcaccttttctgaccacgacactgcc
atcattccagccagtaacaatccgtactttagagaccaagctcgattcccagtgcttgtg
acttctgacctggataaatatctgaggcgggaggccctgtctgtgtacgtttttgatgat
gaagactcagagcctggctcgtaccttggccgggtccaagtgcccttgcttccccttgca
caaaacaaatccattaaaggtgattttaacctcactgaccctgcggggaaccctaatgga
tttgttgaggcgcaactggattggaagtctttctacctacccccagagagcttcctgaaa
ccagaagctcagcctgaggaggacaccaaagacggtttagagctctcatctgaagaggaa
aaggcttccttttctccccaggaccagatggcatttgctgagattccgattgaagctggc
cagtatcaagctaagcgaaagcctccacaggtaggagaaagaaaggaaagggaacaccag
gttgcaagctactcgagaagaaaacatggcaaaagaacaggcgtccaagggaagaacaga
atggagtatcttagtcgtaacatcttaaccggaaatacactacaacaggtgaactacact
gaatggaagttctcagggcttaagagctccatagatgatggtttaaaaaatcagcaaaag
gaagaggaaatgacatcatctcactcagcagtgatggagaaggaagccctaaatcctgta
aatgataaggagtcctgtgagcaagcttctgaagtcagtgaagcaccaactacagacagt
gatgacatagtgacaccagcatctctgaaatgtcctaaggcaggttcggagaagatgtgc
attgaaatcatctccctggccttctacccagaggctggagtgatgtgtgatgagagcgtc
aagcaggtgtacgtagagtacaagttctacgatctacccttgtcggagacggagacccca
gtgtccctgaggaagccacaggcgggagaagagatccacttccacttcagcaaagtgata
gacctggacccactggaacaaaaaggccgaaggcagtttctgttcgccatgctgaacaga
caagatcctgagcagggacgtttaaagtttacagtggtaagtgatcctatggatgatgaa
aagaaagaatgtcaagaagtgggatacgcgtttctggaactgtggcagaacatggaatca
ggaaaagacggtgtagagcaaggtctagacattgtcagttctgaagatcaggccaccaaa
ataggacggctgaaggtgtcccttcgagctgctgccgccctccatgctatttacaaggag
atgacagaagagaggttttcgtga
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