Ailuropoda melanoleuca (giant panda): 100468086
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Entry
100468086 CDS
T01329
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X7
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100468086 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100468086 (SPATA13)
Membrane trafficking [BR:
aml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100468086 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
100468086
NCBI-ProteinID:
XP_011225101
Ensembl:
ENSAMEG00000014159
UniProt:
A0A7N5P1Q5
LinkDB
All DBs
Position
7:complement(65699060..66027237)
Genome browser
AA seq
1246 aa
AA seq
DB search
MTTAQNGHGRLAAIPCSVSDPKDSKMVTYPACQNGGCSSSYCGEAEAQEARLSPAKLMRL
FSVSRKRTSDNPERPRSMVLMGNSSTWNALASFRKMGSFKKLKSSVLQGIQNREGSDEAK
EDAPERDPGKPIPNGAAIGMQTSGCPSSGPASDAPKAGPGGASDCSDPEEADDAFQRSTH
RSRSIRRAYGLGRISLLDCEKLQGTQNHVRPLAPVTQEPTVCEILVKDSENNSIIYRKSK
STDNLNFLKKSSFKRKSTSNLTDLKGAHEKPAPRRTLSSSSADSEKFGGSERRTKRWKSP
LRAKDFDRVLRFVSSATDAAWRRESPRSGAPSPGEASQRLQVHSRLHDAYSRRVSANAER
EWRRCAGAHAGSGCGSAGAPSHQVDVDTAVFPLEASGPWAAESARPCAGSASSSPVVQDS
DERQAGGQFTFEPEQPLTPPRPTTPKPPSPQSPGAGNATCPSSLSALSLSSVDSEERAEG
PVTSRDSVQAASDRGSEDSASTHPQLSPHLASGPEERKEEVVTEESWRRGSSRDEERTES
QRITRRKWGSGRRSRPRPLSDYGQLANRSLSIPEDSIAVDPQKEDTVEGDHQPNTASTDP
ADQNPAVGCPKGSWRRRPISVIGGVSFYGNSPTEEIESLLTQPAARPPVPAHQVLPYKAV
SARFRPFTFSQSTPIGLDRVGRRRQMRASNVSSDGGTESAALVDDNGSEEDYSYEDLCQA
NPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWW
GRNEDKEAWFPASFVRLRVNQEEPSENSSSTQGEELEEDAGKNRHKHSESKHQMRTNVIQ
EIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQ
YNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELSNLMKQGRYRHFFEACRLLQQ
MIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKR
RLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTRITKHGKSQQRTFFLFDHQLVSC
KKDLLRRDVLYYRGRTDMDGVELVDLEDGRDKDWNLNVRNAFKLVSKTTDEVHLFCAKKQ
EDKARWLQACGDERRRVQEDREMGMEISENQKKLAMLNAQKAGHGKSKGYSGCPVAPPHQ
SLHPLHQRHVTVPTSVPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagctcagaatggccatgggcgacttgccgcaatcccatgttctgtctcggat
cccaaagactccaaaatggtgacttacccagcatgtcagaatggaggatgcagcagcagc
tactgcggggaggcggaagcccaggaggccagactcagcccggccaagctcatgcgcctc
ttctccgtgagcaggaagaggaccagcgacaaccccgagaggccccgctccatggtcctg
atgggaaactcctccacctggaatgctctggcctcctttcggaaaatgggatctttcaaa
aaattgaagtcctccgtccttcaaggaattcagaaccgagagggctcagatgaggcaaag
gaagacgcccccgaacgtgacccagggaaacccatcccgaacggcgctgcaatcggaatg
caaaccagcgggtgcccctcctcgggaccagcaagcgacgccccgaaggcagggccaggg
ggcgcgtcggactgctccgaccctgaagaggccgacgacgccttccagaggagcacccat
cggtcccgcagcatccgccgcgcctatggcctgggccgcatcagcctcctggattgcgag
aagcttcaagggacccagaaccacgtccggccgctggcccctgtcacccaggagcccacc
gtgtgtgagatcctagtgaaggactctgagaacaacagcatcatctacaggaaaagcaag
agcacagataacttgaactttctgaagaagagctccttcaaacggaagtccacctcaaat
ctcacggacctcaagggggcgcacgaaaagcccgcgccccggcggacactaagcagttca
tctgccgactcggaaaagttcggtgggtccgagaggaggacgaaacgctggaagagccca
ctgcgggccaaggactttgacagagtcctgaggtttgtgagcagcgccacggacgcggcc
tggaggagagagagccccaggagcggggcgccctcgccgggcgaggcgagccagcggctg
caggtgcacagcaggctgcacgacgcctactcccgccgcgtgtctgccaacgccgagcgt
gagtggaggaggtgcgcaggcgcgcacgcaggctcggggtgcggctccgctggggctccg
agccaccaggtggacgtggacacggccgtctttcctctggaagcctcaggcccctgggcg
gctgaaagtgcccgtccttgcgctggcagcgcctcatcgagtccggttgtccaggactcg
gatgaacgccaagctggcggccagtttacattcgaacctgagcagccgctcaccccccca
aggcctaccacacccaagccccctagccctcagagcccaggcgcaggaaatgccacgtgt
cccagcagtctcagtgcgctgtccctgagttcagtggacagtgaagaaagggcagagggg
cctgtgacctcccgggattctgtgcaagccgcaagtgacagaggcagtgaggacagcgcc
agcacccaccctcagctgagcccccacctggcgtcgggtccagaagaaaggaaggaggag
gttgtgacagaggaatcctggaggcggggctcatcccgggatgaagaaaggacagaatca
cagaggatcaccaggaggaaatggggttctgggagaagatccaggccccgaccactctct
gactatggccagctggccaaccggagtctgtctattcctgaagactcaattgctgtagac
ccccagaaagaagacactgtggagggagaccaccagccaaacacggcctccacggaccct
gcagaccagaaccctgctgtgggctgccccaaaggaagctggagaagacgccccatctct
gtgataggcggggtcagcttctatgggaacagcccaacagaggaaatagagagccttcta
acccaaccggcagccaggcctcctgtgcccgctcaccaggtgctgccctacaaggcggtt
tcggcccgcttccggcccttcaccttctcccagagcacccccattgggctggaccgcgtg
ggacgccggcggcagatgcgagcatccaatgtttcttcagatggaggcactgagtctgct
gccttagtggatgacaacggcagtgaggaggactatagctatgaagacctctgtcaggcc
aaccccagatacctacagccaggcggggagcagctggccatcaacgagctgatcagcgat
ggcagtgtggtctgcgcggaagccctatgggaccacgtgaccatggacgaccaggagctg
ggcttcaaggcaggagatgtcatccaggttctggaagcctctaacaaggactggtggtgg
ggccggaatgaggacaaggaagcctggtttcccgcaagctttgtcagattgcgtgtcaat
caggaagagccgtcggagaattccagcagcacccagggcgaggagctggaggaggatgcc
ggcaagaaccgccacaaacactcggagagcaagcaccagatgaggaccaatgtcatccag
gagatcatgaacacggagcgggtgtacatcaagcacctcaaggacatctgtgagggctat
attcgacagtgtcgcaagcacacgggaatgttcactgttgcacaactagccaccattttt
ggaaacattgaggatatttacaaattccaaagaaagttcctgaaagaccttgagaaacag
tacaataaagaggaacctcatttaagtgaaataggatcctgctttcttcaacaccaagag
ggctttgccatctattccgagtactgtaacaaccatccgggcgcctgtgcggagctgtcc
aacctgatgaagcagggcaggtacagacacttctttgaagcctgccgcctgctccaacag
atgattgacatcgccatcgacgggttcctgctgacgccggtgcagaagatctgcaagtac
cctctgcagctggccgagctgctcaagtacaccacgcaggagcacagtgattacagcaac
ataaaggcagcctatgaagccatgaagaacgtagcctgtctgatcaacgagcgcaagcgc
aggctggaaagcatcgacaagatagcgcggtggcaggtgtccattgtaggctgggagggg
ctggatatcctagaccgaagttccgaactgatccattctggggaactgaccagaatcacc
aagcacggcaagagccagcagcggacgttcttcctgtttgaccaccagctggtgtcgtgc
aagaaggacctgctgcgtagggacgtgctctactaccgaggccgcacggacatggatggg
gtggagcttgtggacctggaggacggccgggacaaggactggaacctcaacgtgaggaac
gcgttcaagctcgtcagcaaaaccaccgacgaagttcatctgttctgtgccaaaaagcaa
gaggacaaggcgcggtggctgcaggcctgtggggatgaaaggcggcgcgtgcaggaggac
cgcgagatgggaatggaaatttcagaaaatcaaaagaaactcgccatgttaaatgctcaa
aaggcgggacatggaaagtcaaaaggctacagcggatgccccgtggccccgccgcaccag
agcttgcaccccctccaccagcgccacgtcaccgtgcccaccagcgtcccccagcagcag
gtgtttgccctggcagaacccaagaggaagccgtctctcttctggcacacattcaacaaa
ctcactcctttcaagaaatga
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